diff --git a/lab_dge.Rmd b/lab_dge.Rmd index b17df6b4..076e7d58 100644 --- a/lab_dge.Rmd +++ b/lab_dge.Rmd @@ -245,7 +245,7 @@ Overdispersion is the reason why RNA-Seq data is better modelled as negative-bin The log fold change is computed from the corrected count values as such: ``` -FC = (corrected counts group B - corrected counts group A) / corrected counts group A +FC = corrected counts group B / corrected counts group A logFC = log2(FC) ``` diff --git a/slide_dge.Rmd b/slide_dge.Rmd index 3e5be1e1..05bf441c 100644 --- a/slide_dge.Rmd +++ b/slide_dge.Rmd @@ -127,7 +127,7 @@ name: dge-test ## Testing -- Log2 fold changes changes are computed after GLM fitting +- Log2 fold changes changes are computed after GLM fitting `FC = counts group B / counts group A` ```{r} dg <- nbinomWaldTest(d)