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OneCellTwoOsc.ode.setsb
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## Set file for OneCellTwoOsc.ode on Thu Jan 16 20:15:34 2014
8 Number of equations and auxiliaries
20 Number of parameters
# Numerical stuff
1 nout
40 nullcline mesh
8 Qual RK
10000 total
0.1 DeltaT
0 T0
0 Transient
500001 Bound
1e-12 DtMin
1 DtMax
0.001 Tolerance
0.001 Abs. Tolerance
0 Max Delay
100 Eigenvector iterates
0.001 Eigenvector tolerance
0.001 Newton tolerance
0 Poincare plane
1e-05 Boundary value tolerance
1e-05 Boundary value epsilon
20 Boundary value iterates
0 Poincare None
1 Poincare variable
1 Poincare sign
0 Stop on Section
0 Delay flag
10000 Current time
10000 Last Time
1 MyStart
1 INFLAG
# Delays
-50
0.004
0.33
0.03
0.93
# Bndry conds
0
0
0
0
0
# Old ICs
-49.42172818719667 V
0.006018887841041419 N
0.3993173817399912 H
0.0247530791180861 C
0.941723602876669 L
# Ending ICs
-49.62249385170052 V
0.005732605363421063 N
0.3976212815079196 H
0.0247530791180861 C
0.941723602876669 L
# Parameters
21 Cms
0 I_aps
11.2 gk
28 gna
2.5 gnap
2.3 gl
0.74 Kcan
0.97 ncan
0.7 gcan
0.9 I
1.25 Ct
2.5e-05 fi
31000 P
1 Ki
0.4 Ka
400 Ve
0.2 Ke
0.005 A
0.4 Kd
0.185 sigma
# Graphics
0.7071097251469876 rm
-0.4999999999826661 rm
0.4999958366025516 rm
0.7071038372138505 rm
0.5000041633974482 rm
-0.4999999999826661 rm
0 rm
0.7071038372138505 rm
0.7071097251469876 rm
0
1
2
1
0
0
1
2
1
0
0
1
2
1
0
0
1
2
1
0
0
1
2
1
0
0
1
2
1
0
0
1
2
1
0
0
1
2
1
0
0
1
2
1
0
0
1
2
1
0
-1000
1000
0
0 3DFlag
1 Timeflag
0 Colorflag
0 Type
1 color scale
0 minscale
10000 xmax
0 xmin
10 ymax
-60 ymin
12 zmax
-12 zmin
5000
0.0002
-25
0.02857142857142857
0
0.08333333333333333
45 Theta
45 Phi
0 xshft
0 yshft
0 zshft
0 xlo
-60 ylo
0
-60
10000 xhi
10 yhi
10000
10
# Transpose variables etc
V
2 n columns
1 n rows
1 row skip
1 col skip
1 row 0
# Coupling stuff for H funs
0
0
0
0
0
# Array plot stuff
1 NCols
0 Row 1
50 NRows
8 RowSkip
0 Zmin
1 Zmax
# Torus information
0 Torus flag 1=ON
6.283185307179586 Torus period
# Range information
Cms
-1 eq-range stab col
0 shoot flag 1=on
10 eq-range steps
0 eq_range low
1 eq_range high
V
V
20 Range steps
0 Cycle color 1=on
1 Reset data 1=on
1 Use old I.C.s 1=yes
0 Par1 low
0 Par2 low
1 Par1 high
1 Par2 high
Cms
0 BVP side
0 color cycle flag 1=on
10 BVP range steps
0 BVP range low
1 BVP range high
RHS etc ...
dV/dT=(-I_K-I_NA-I_NAP-I_L-I_APS-I_CAN)/CMS
dN/dT=(NINF-N)/TAUN
dH/dT=(HINF-H)/TAUH
dC/dT=FI*(J_ER_IN-J_ER_OUT)
dL/dT=A*(KD-(C+KD)*L)
CE=CE
ICAN=I_CAN
INAPS=I_NAP
where ...
MINF = 1/(1+EXP((V-VM) /SM))
NINF = 1/(1+EXP((V-VN) /SN))
MINFP = 1/(1+EXP((V-VMP)/SMP))
HINF = 1/(1+EXP((V-VH) /SH))
TAUN = TAUNB/COSH((V-VN)/(2*SN))
TAUH = TAUHB/COSH((V-VH)/(2*SH))
I_NA = GNA*MINF^3*(1-N)*(V-VNA)
I_K = GK*N^4*(V-VK)
I_NAP = GNAP*MINFP*H*(V-VNA)
I_L = GL*(V-VLEAKS)
CANINF = 1/(1+(KCAN/C)^NCAN)
I_CAN = GCAN*CANINF*(V-VNA)
J_ER_IN = (LL + P*( (I*C*L)/( (I+KI)*(C+KA) ) )^3 )*(CE - C)
J_ER_OUT = VE*C^2/(KE^2+C^2)
CE = (CT - C)/SIGMA