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publications.html
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<h1 class="title toc-ignore">Publications</h1>
</div>
<div id="section" class="section level2">
<h2>2023</h2>
<ul>
<li><p>[preprint] Marie Du Roy de Chaumaray, Salima El Kolei,
Marie-Pierre Etienne, Matthieu Marbac. Estimation of the Order of
Non-Parametric Hidden Markov Models using the Singular Values of an
Integral Operator. <a
href="https://arxiv.org/abs/2210.03559">arXiv</a></p></li>
<li><p>[preprint] Léa Pautrel, Sylvain Moulherat, Olivier Gimenez,
Marie-Pierre Etienne. Analysing biodiversity observation data collected
in continuous time: Should we use discrete or continuous-time occupancy
models? <a
href="https://www.biorxiv.org/content/biorxiv/early/2023/11/17/2023.11.17.567350.full.pdf">bioRxiv</a></p></li>
<li><p>[preprint] Baptiste Alglave, Kasper Kristensen, Etienne Rivot,
Mathieu Woillez, Youen Vermard, Marie-Pierre Etienne. Inferring fine
scale wild species distribution from spatially aggregated data <a
href="https://hal.science/hal-03878990/document">hal</a>.</p></li>
<li><p>Alice Martin, Marie-Pierre Étienne, Pierre Gloaguen, Sylvain Le
Corff, Jimmy Olsson. Backward Importance Sampling for Online Estimation
of State Space Models <a
href="https://www.tandfonline.com/doi/abs/10.1080/10618600.2023.2174125">Journal
of Computational and Graphical Statistics</a></p></li>
<li><p>Baptiste Alglave, Youen Vermard, Etienne Rivot, Marie-Pierre
Etienne, Matthieu Woillez. Identifying fish spawning grounds by
combining catch declarations and scientific survey data, <a
href="https://cdnsciencepub.com/doi/abs/10.1139/cjfas-2022-0110">Canadian
Journal of Fisheries and Aquatic Sciences, janvier 2023</a></p></li>
</ul>
</div>
<div id="section-1" class="section level2">
<h2>2022</h2>
<ul>
<li><p>Maxime Jeanjean, Sylvaine Goix, Julien Dron, Marine Periot,
Annabelle Austruy, Khaled Douib, Renaud Persoons, Marie-Pierre Etienne,
Gautier Revenko, Philippe Chamaret. Influence of Environmental and
Dietary Exposures on Metals Accumulation Among the Residents of a Major
Industrial Harbour (Fos-sur-Mer, France) accepted in <a
href="https://www.sciencedirect.com/science/article/pii/S0946672X22001018">Journal
of Trace Elements in Medicine and Biology</a>.</p></li>
<li><p>[preprint] Baptiste Alglave, Youen Vermard, Etienne Rivot,
Marie-Pierre Etienne, Matthieu Woillez Woillez. Identifying fish
spawning grounds by combining catch declarations and scientific survey
data <a
href="https://hal.archives-ouvertes.fr/hal-03674691/document">pdf</a>.</p></li>
<li><p>Baptiste Alglave, Etienne Rivot, Marie-Pierre Etienne, Mathieu
Woillez, Youen Vermard. Combining scientific survey and commercial catch
data to map fish distribution. <a
href="https://academic.oup.com/icesjms/article/79/4/1133/6543974">ICES
Journal of Marine Science, Volume 79, Issue 4, May 2022, Pages
1133–1149</a></p></li>
<li><p>[Book Chapter] Marie-Pierre Etienne and Pierre Gloaguen.
Trajectory Reconstruction and Behavior Identification Using Geolocation
Data in the book <em>Statistical Approaches for Hidden Variables in
Ecology</em> co edited by Olivier Gimenez and Nathalie Peyrard <a
href="https://www.iste.co.uk/book.php?id=1859">ici</a></p></li>
</ul>
</div>
<div id="section-2" class="section level2">
<h2>2021</h2>
<ul>
<li><p>Marie-Pierre Etienne. The Hidden part of Markovian Stochastic
processes for Biology and Ecology <a
href="MesPapiers/2021_hdr_etienne.pdf">pdf</a></p></li>
<li><p>Jeanjean, M., Goix, S., Periot, M., Douib, K., Dron, J., Etienne,
M. P., … & Chamaret, P. (2021). Environmental and Dietary Exposures
Near a Major Industrial Harbour (Fos-sur-Mer, France) Identified as a
Significant Pathway for PCBs and PCDD/Fs Accumulation in Residents’
Blood Serum. <a
href="https://link.springer.com/article/10.1007/s12403-021-00395-8">Exposure
and Health, 1-18.</a></p></li>
<li><p>F. Behivoke, MP Etienne, J Guitton, R M Randriatsara, E
Ranaivoson, M Léopold. Estimating fishing effort in small-scale
fisheries using GPS tracking data and random forests. <a
href="https://www.sciencedirect.com/science/article/pii/S1470160X20312632">Ecological
Indicators. 123 (2021) 107321</a></p></li>
<li><p>R Joo, N Bez, MP Etienne, P Marin, N Goascoz, J Roux, S Mahévas.
Identifying partners at sea from joint movement metrics of pelagic pair
trawlers. <a
href="https://academic.oup.com/icesjms/article-abstract/78/5/1758/6276504">ICES
Journal of Marine Science. Volume 78, Issue 5 (2021)</a></p></li>
</ul>
</div>
<div id="before-2020" class="section level2">
<h2>Before 2020</h2>
<ul>
<li><ol start="2020" style="list-style-type: decimal">
<li>J Genitoni, D Vassaux, A Delaunay, S Citerne, L Portillo Lemus, MP.
Etienne, D Renault, S. Stoeckel, D. Barloy, S. Maury. Hypomethylation of
the aquatic invasive plant, Ludwigia grandiflora subsp. hexapetala
mimics the adaptive transition into the terrestrial morphotype. <a
href="https://onlinelibrary.wiley.com/doi/abs/10.1111/ppl.13162">Physiologia
Plantarum 170 (2), 280-298</a>.</li>
</ol></li>
<li><ol start="2020" style="list-style-type: decimal">
<li>N Tysklind, MP Etienne, C Scotti‐Saintagne, A Tinaut, M Casalis,
Valerie Troispoux SO Cazal, L Brousseau, B Ferry, I Scotti.
Microgeographic local adaptation and ecotype distributions: The role of
selective processes on early life‐history traits in sympatric,
ecologically divergent Symphonia populations. <a
href="https://onlinelibrary.wiley.com/doi/full/10.1002/ece3.6731">Ecology
and evolution 10 (19), 10735-10753</a></li>
</ol></li>
<li><ol start="2019" style="list-style-type: decimal">
<li>Théo Michelot, Pierre Gloaguen, Paul G. Blackwell and Marie-Pierre
Étienne. The Langevin diffusion as a continuous-time model of animal
movement and habitat selection. Methods in Ecology and Evolution 10
(11), 1894-1907. <a
href="https://arxiv.org/abs/1810.10213">arXiV</a></li>
</ol></li>
<li><ol start="2019" style="list-style-type: decimal">
<li>Rémi Patin, Marie-Pierre Étienne, Émilie Lebarbier, Simon
Chamaillé-Jammes,Simon Benhamou. Identifying stationary phases in
multivariate time-series for highlighting behavioural modes and home
range settlements. Journal of Animal Ecology 89 (1), 44-56 <a
href="https://www.biorxiv.org/content/10.1101/444794v1">bioRXiv</a></li>
</ol></li>
<li><ol start="2018" style="list-style-type: decimal">
<li>Marie Perrot-Dockès, Céline Lévy-Leduc, Julien Chiquet, Laure
Sansonnet, Margaux Brégère, Marie-Pierre Étienne, Stéphane Robin,
Grégory Genta-Jouve. <a
href="MesPapiers/2018_Perrot+StatAppliInGenetics.pdf">A variable
selection approach in the multivariate linear model: an application to
LC-MS metabolomics data</a> in <em>Statistical Applications in Genetics
and Molecular Biology</em>.</li>
</ol></li>
<li><ol start="2018" style="list-style-type: decimal">
<li>Rocio Joo, Marie-Pierre Etienne, Nicolas Bez, Stéphanie Mahévas. <a
href="MesPapiers/2018_Joo+MovemenetEcology.pdf">Metrics for describing
dyadic movement: a review</a> <em>Movement Ecology</em></li>
</ol></li>
<li><ol start="2018" style="list-style-type: decimal">
<li>Pierre Gloaguen, Marie-Pierre Étienne, Sylvain Le Corff <a
href="MesPapiers/2018_Gloaguen+EURASIP.pdf">Online sequential Monte
Carlo smoother for partially observed diffusion
processes</a>.<em>EURASIP Journal on Advances in Signal
Processing</em></li>
</ol></li>
<li><ol start="2017" style="list-style-type: decimal">
<li>Pierre Gloaguen, Marie-Pierre Étienne, Sylvain Le Corff <a
href="MesPapiers/2017_Gloaguen+JRSSC.pdf">Stochastic differential
equation based on a multimodal potential to model movement data in
ecology</a>. <em>JRSSC</em></li>
</ol></li>
<li><ol start="2017" style="list-style-type: decimal">
<li>Thomas Denis, Cécile Richard-Hansen, Olivier Brunaux, Marie-Pierre
Etienne, , Stéphane Guitet, Bruno Herault <a href="">Biological traits,
rather than environment, shape detection curves of large vertebrates in
neotropical rainforests</a><em>Ecological Applications</em></li>
</ol></li>
<li><ol start="2016" style="list-style-type: decimal">
<li>Mia Wege, Marie-Pierre Etienne, W. Chris Oosthuizen, Ryan R.
Reisinger, Marthán N. Bester, P. J. Nico De Bruyn <a
href="MesPapiers/2016_Wege+MarineMammalScience.pdf">Trend changes in
sympatric Subantarctic and Antarctic fur seal pup populations at Marion
Island, Southern Ocean</a>.<em>Marine Mammal science</em></li>
</ol></li>
<li><ol start="2016" style="list-style-type: decimal">
<li>Nicolas C. Friggens, Christine Duvaux-Ponter, Marie-Pierre Etienne,
Tristan Mary-Huard, Philippe Schmidely. <a
href="MesPapiers/2016_Friggens+JDS.pdf">Characterizing individual
differences in animal responses to a nutritional challenge: Toward
improved robustness measures</a>. <em>Journal of Diary Science</em></li>
</ol></li>
<li><ol start="2015" style="list-style-type: decimal">
<li>Ophélie Sauzet, Cécilia Cammas, Pierre Barbillon, Marie-Pierre
Étienne, David Montagne. <a
href="MesPapiers/2015_Sauzet+Geoderma.pdf">Illuviation intensity and
land use change: Quantification via micromorphological analysis</a>.
<em>Geoderma</em>.</li>
</ol></li>
<li><ol start="2014" style="list-style-type: decimal">
<li>Pierre Gloaguen, Stéphanie Mahévas, Etienne Rivot, Mathieu Woillez,
Jérôme Guitton, Youen Vermard, Marie-Pierre Etienne. <a
href="MesPapiers/2014_Gloaguen+Environmetrics.pdf">An autoregressive
model to describe fishing vessel movement and activity</a>.
<em>Environmetrics</em>.</li>
</ol></li>
<li><ol start="2014" style="list-style-type: decimal">
<li>Olivier Gimenez, Stephen T. Buckland, Byron J. T. Morga, Nicolas
Bez, Sophie Bertrand, Rémi Choquet, Stéphane Dray, Marie-Pierre Etienne,
Rachel Fewster, Frédéric Gosselin, Bastien Mérigot, Pascal Monestiez,
Juan M. Morales, Frédéric Mortier, François Munoz, Otso Ovaskainen,
Sandrine Pavoine, Roger Pradel, Frank M. Schurr, Len Thomas, Wilfried
Thuiller, Verena Trenkel,Perry de Valpine , Eric Rexstad. <a
href="MesPapiers/2014_Gimenez+BiologyLetters.pdf">Statistical ecology
comes of age</a>. <em>Biology Letters</em></li>
</ol></li>
<li><ol start="2013" style="list-style-type: decimal">
<li>Jean-Baptiste Lecomte, Hugues P. Benoît, Sophie Ancele, Marie-Pierre
Etienne, Liliane Bel, Eric Parent.<a
href="2013_Lecomte+Methods_in_Ecology_and_Evolution.pdf">Compound
Poisson-gamma vs. delta-gamma to handle zero-inflated continuous data
under a variable sampling volume</a>. <em>Methods in Ecology and
Evolution</em></li>
</ol></li>
<li><ol start="2013" style="list-style-type: decimal">
<li>Jean-Baptiste Lecomte, Hugues P. Benoît, Marie-Pierre Etienne,
Liliane Bel, Eric Parent.<a
href="MesPapiers/2013_Lecomte+EcologicalModelling.pdf">Modeling the
habitat associations and spatial distribution of benthic
macroinvertebrates: A hierarchical Bayesian model for zero-inflated
biomass data</a>. <em>Ecological Modelling</em></li>
</ol></li>
<li><ol start="2012" style="list-style-type: decimal">
<li>Maximilien Simon, Jean-Marc Fromentin, Sylvain Bonhommeau, Daniel
Gaertner, Jon Brodziak, Marie-Pierre Etienne <a
href="MesPapiers/2012_Simon+PlosOne.pdf">Effects of Stochasticity in
Early Life History on Steepness and Population Growth Rate Estimates: An
Illustration on Atlantic Bluefin Tuna</a>. <em>Plos One</em></li>
</ol></li>
<li><ol start="2011" style="list-style-type: decimal">
<li>J. Matias Braccini, Marie-Pierre Etienne, Steve . J. D. Martell. <a
href="MesPapiers/2011_Braccini+Marine_and_Freshwater_Research.pdf">Subjective
judgement in data subsetting: implications for CPUE standardisation and
stock assessment of non-target chondrichthyans</a>. <em>Marine and
Freshwater Research</em></li>
</ol></li>
<li><ol start="2010" style="list-style-type: decimal">
<li>Sophie Ancelet, Marie-Pierre Etienne, Hugues Benoît, Eric Parent. <a
href="MesPapiers/2010_Ancelet+ESS.pdf">Modelling spatial zero-inflated
continuous data with an exponentially compound Poisson
process</a>.<em>Environmental and Ecological Statistics</em></li>
</ol></li>
<li><ol start="2009" style="list-style-type: decimal">
<li>Sarah Groc, Jérôme Orivel, Alain Dejean, Jean-Michel Martin,
Marie-Pierre Etienne, Bruno Corbara, Jacques H. C. Delabie.<a
href="MesPapiers/2009_Groc+icad.pdf">Baseline study of the leaf-litter
ant fauna in a French Guianese forest</a>. <em>Insect Conservation and
Diversity</em></li>
</ol></li>
<li><ol start="2004" style="list-style-type: decimal">
<li>Marie-Pierre Etienne, Pierre Vallois <a
href="MesPapiers/2004_Etienne+MCAP.pdf">Approximation of the
Distribution of the Supremum of a Centered Random Walk. Application to
the Local Score</a>. <em>Methodology and Computing in Applied
Probability</em></li>
</ol></li>
<li><ol start="2003" style="list-style-type: decimal">
<li>Jean-Jacques Daudin, Marie-Pierre Etienne, Pierre Vallois. <a
href="MesPapiers/2003_Daudin+SPA.pdf">Asymptotic behavior of the local
score of independent and identically distributed random sequences</a>.
<em>Stochastic Processes and their Applications</em></li>
</ol></li>
</ul>
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