Skip to content

Issues: ME-ICA/tedana

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

85 Open 499 Closed
85 Open 499 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

inconsistent flipping of ICA component signs decomposition issues related to decomposition methods documentation issues related to improving documentation for the project effort: medium Theoretically <40h total work priority: medium Should get addressed soon
#1206 opened Apr 8, 2025 by handwerkerd
How to distribute more decision trees with tedana community issues related to building a healthy community discussion issues that still need to be discussed enhancement issues describing possible enhancements to the project priority: high issues that would be really helpful if they were fixed already TE-dependence issues related to TE dependence metrics and component selection
#1205 opened Apr 4, 2025 by handwerkerd
8
tedana workflow fails when using --t2smap without --no-reports bug issues describing a bug or error found in the project
#1204 opened Apr 2, 2025 by tsalo
Replace --mir argument with --gscontrol mir in ica_reclassify breaking change WIll make a non-trivial change to outputs
#1186 opened Mar 10, 2025 by tsalo
2
Accept --ctab argument in ica_reclassify enhancement issues describing possible enhancements to the project
#1182 opened Mar 7, 2025 by tsalo
1
3
New quality control measure: Fraction of accepted/rejected common variance effort: low Theoretically less than a day's work enhancement issues describing possible enhancements to the project good first issue issues that we think are good for new contributors. Equivalent to "very low" effort. impact: low Improving code/documentation cleanliness/clarity, not function priority: low issues that are not urgent reports issues related to boilerplate generation or visual reports
#1180 opened Mar 4, 2025 by handwerkerd
Documenting scripts to prepare ROI time series & create external regressors documentation issues related to improving documentation for the project effort: medium Theoretically <40h total work enhancement issues describing possible enhancements to the project impact: medium Improves code/documentation functionality for some users priority: medium Should get addressed soon TE-dependence issues related to TE dependence metrics and component selection
#1175 opened Feb 19, 2025 by handwerkerd
2
Revisiting tedana leadership list & roles community issues related to building a healthy community discussion issues that still need to be discussed documentation issues related to improving documentation for the project
#1174 opened Feb 19, 2025 by handwerkerd
Add recommendations on --n-robust-runs and --maxit documentation issues related to improving documentation for the project
#1148 opened Nov 16, 2024 by tsalo
4
ICA on spatially or temporally concatenated multi-echo data decomposition issues related to decomposition methods discussion issues that still need to be discussed
#1133 opened Sep 22, 2024 by tsalo
6
Adding a conservative elbow-free decision tree effort: medium Theoretically <40h total work enhancement issues describing possible enhancements to the project good first issue issues that we think are good for new contributors. Equivalent to "very low" effort. impact: medium Improves code/documentation functionality for some users priority: medium Should get addressed soon TE-dependence issues related to TE dependence metrics and component selection
#1129 opened Sep 17, 2024 by handwerkerd
1
3
Nonlinear Curve fitting is slow, and other anatomical T2star fitting issues discussion issues that still need to be discussed enhancement issues describing possible enhancements to the project T2*/S0 estimation issues related to the estimation of T2* and S0
#1091 opened May 2, 2024 by dowdlelt
1
Add global signal (if --gscontrol gsr is used) to component plots enhancement issues describing possible enhancements to the project reports issues related to boilerplate generation or visual reports
#1087 opened Apr 21, 2024 by tsalo
2
Elegantly handle missing images in HTML report bug issues describing a bug or error found in the project reports issues related to boilerplate generation or visual reports
#1084 opened Apr 19, 2024 by tsalo
1
Improve dropout adaptive mask method in cases where multiple bad echoes occur early on enhancement issues describing possible enhancements to the project
#1083 opened Apr 18, 2024 by tsalo
2
Using tedana in conjunction with rapidtide discussion issues that still need to be discussed enhancement issues describing possible enhancements to the project question issues detailing questions about the project or its direction
#1071 opened Apr 10, 2024 by tsalo
7
reshape_niimg() may be too flexible bug issues describing a bug or error found in the project documentation issues related to improving documentation for the project
#1070 opened Apr 10, 2024 by tsalo
1
Detrending & tedana (or detrended variance explained) effort: medium Theoretically <40h total work enhancement issues describing possible enhancements to the project impact: medium Improves code/documentation functionality for some users
#1054 opened Feb 29, 2024 by handwerkerd
9
Censoring data within tedana effort: high More than 40h total work enhancement issues describing possible enhancements to the project impact: medium Improves code/documentation functionality for some users
#1053 opened Feb 29, 2024 by handwerkerd
7
Limit selection node functions to minimal inputs refactoring issues proposing/requesting changes to the code which do not impact behavior
#1052 opened Feb 29, 2024 by tsalo
1
Rename ComponentSelector to DecisionTree refactoring issues proposing/requesting changes to the code which do not impact behavior
#1051 opened Feb 29, 2024 by tsalo
1
Improve multi-echo acquisition recommendations discussion issues that still need to be discussed documentation issues related to improving documentation for the project
#1049 opened Feb 28, 2024 by tsalo
5
RobustICA behaviour on non-convergence
#1047 opened Feb 26, 2024 by Lestropie
3
What modifications can be done to optimally combine ASL signal instead of BOLD ?
#1046 opened Feb 23, 2024 by sboylan
6
Add a check on volumes and TE input order bug issues describing a bug or error found in the project
#1041 opened Feb 21, 2024 by tsalo
ProTip! Type g i on any issue or pull request to go back to the issue listing page.