Code

Update GTDB download and formatting#366

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jason-c-kwan merged 13 commits intodevKwanLab/Autometa:devfrom gtdbKwanLab/Autometa:gtdbCopy head branch name to clipboardDec 10, 2024

Commits

Commits on Oct 28, 2024

• 🐛 overhaul of GTDB download and setup

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Commits on Oct 29, 2024

• 🐛 overhaul of GTDB download and setup

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• 📝 update gtdb download documentation

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• 🐛 make compatible with pre-Python version 3.9

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• 🐛 fix gtdb download tests

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Commits on Dec 5, 2024

• add back shebang

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Commits on Dec 6, 2024

• ensure gtdb directories exist

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• change default GTDB host url

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• fix GTDB base url

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• fix url

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Commits on Dec 9, 2024

• prevent GTDB versions <220

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• update documentation to reflect version 220 or greater

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Commits on Dec 10, 2024

• bump action versions

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