non-option argument

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KellisLab · Jun 11, 2024 · 74e67e1 · 74e67e1
1 parent b2472f6
commit 74e67e1
Showing 1 changed file with 0 additions and 2 deletions.
diff --git a/scripts/deg.R b/scripts/deg.R
@@ -121,11 +121,9 @@ options:
         } else if (arg == "--keep-covariates") {
             i = i + 1
             params$only_ruv = FALSE
-            i = i + 1
         } else if (arg == "--only-ruv") {
             i = i + 1
             params$only_ruv = TRUE
-            i = i + 1
         } else if (arg == "--control") {
             i = i + 1
             params$control = args[[i]]