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autoreconf.yml
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Re-added optional cpm.cutoff Autoreconf Dist #152: Commit 7285bd7 pushed by benjamin-james
January 15, 2025 17:10 37s dev
dev
January 15, 2025 17:10 37s
misplaced parentheses Autoreconf Dist #151: Commit 5e77d76 pushed by benjamin-james
December 10, 2024 18:48 24s dev
dev
December 10, 2024 18:48 24s
correct arg Autoreconf Dist #150: Commit ce1655b pushed by benjamin-james
December 10, 2024 17:45 25s dev
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December 10, 2024 17:45 25s
Shrinking correct index Autoreconf Dist #149: Commit afc8ad3 pushed by benjamin-james
December 10, 2024 16:47 25s dev
dev
December 10, 2024 16:47 25s
change default to ashr Autoreconf Dist #148: Commit d0927e5 pushed by benjamin-james
December 5, 2024 20:27 23s dev
dev
December 5, 2024 20:27 23s
shrinking correct coefficient Autoreconf Dist #147: Commit a390db8 pushed by benjamin-james
December 5, 2024 19:09 22s dev
dev
December 5, 2024 19:09 22s
updated pseudobulk, pbfacet, quad split Autoreconf Dist #146: Commit 9d82d03 pushed by benjamin-james
November 27, 2024 18:13 24s dev
dev
November 27, 2024 18:13 24s
Add shrinkage to DESeq2 Autoreconf Dist #145: Commit 4ed66b5 pushed by benjamin-james
November 4, 2024 17:23 26s dev
dev
November 4, 2024 17:23 26s
Added harmonic mean p-value Autoreconf Dist #144: Commit 0c4c253 pushed by benjamin-james
October 31, 2024 19:52 28s dev
dev
October 31, 2024 19:52 28s
Provide centroid for reference Autoreconf Dist #143: Commit dced7b4 pushed by benjamin-james
October 30, 2024 21:44 23s dev
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October 30, 2024 21:44 23s
Print outliers specifically Autoreconf Dist #142: Commit 8e083b2 pushed by benjamin-james
October 30, 2024 21:36 23s dev
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October 30, 2024 21:36 23s
Keep independent filtering on by default Autoreconf Dist #141: Commit e28b8d1 pushed by benjamin-james
October 30, 2024 20:56 25s dev
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October 30, 2024 20:56 25s
Change to edgeR style filtering Autoreconf Dist #140: Commit 05ef111 pushed by benjamin-james
October 29, 2024 20:47 28s dev
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October 29, 2024 20:47 28s
logic for no go terms Autoreconf Dist #139: Commit 43a9edf pushed by benjamin-james
October 22, 2024 15:56 27s dev
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October 22, 2024 15:56 27s
pca mask_var Autoreconf Dist #138: Commit 638fae9 pushed by benjamin-james
October 16, 2024 03:54 24s dev
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October 16, 2024 03:54 24s
Add glmGamPoi Liang-Zeger cluster-robust standard errors Autoreconf Dist #137: Commit 400a95e pushed by benjamin-james
October 10, 2024 02:20 22s dev
dev
October 10, 2024 02:20 22s
Get first gene in underscore, so addGO.R can work automatically Autoreconf Dist #136: Commit 23008b3 pushed by benjamin-james
September 24, 2024 20:20 29s dev
dev
September 24, 2024 20:20 29s
Case for adding log2FC, FDR Autoreconf Dist #135: Commit e05829f pushed by benjamin-james
September 6, 2024 02:50 25s dev
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September 6, 2024 02:50 25s
Add custom gene column Autoreconf Dist #134: Commit c367b28 pushed by benjamin-james
September 6, 2024 01:09 31s dev
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September 6, 2024 01:09 31s
minCount=3 Autoreconf Dist #133: Commit 776ba5d pushed by benjamin-james
August 30, 2024 19:17 26s dev
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August 30, 2024 19:17 26s
Move log2FC inside Autoreconf Dist #132: Commit 15a930c pushed by benjamin-james
August 29, 2024 13:13 30s dev
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August 29, 2024 13:13 30s
Added frac_n Autoreconf Dist #131: Commit eab267b pushed by benjamin-james
August 29, 2024 03:00 31s dev
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August 29, 2024 03:00 31s
change CPM cutoff Autoreconf Dist #130: Commit cd2e1b1 pushed by benjamin-james
August 28, 2024 13:59 29s dev
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August 28, 2024 13:59 29s
bugfix Autoreconf Dist #129: Commit ed588f1 pushed by benjamin-james
August 27, 2024 21:02 25s dev
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August 27, 2024 21:02 25s
dimension issue Autoreconf Dist #128: Commit 949446c pushed by benjamin-james
August 27, 2024 20:19 32s dev
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August 27, 2024 20:19 32s