Popular repositories Loading

1. zol zol Public

   zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)

   Python 59 4

2. lsaBGC lsaBGC Public

   lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters

   Python 37 4

3. lsaBGC-Pan lsaBGC-Pan Public

   lsaBGC - suite for pan-BGC-omics analysis

   Python 19 2

4. codoff codoff Public

   codoff: a program to measure the irregularity of the codon usage for a single genomic region (e.g. a BGC, phage, etc.) relative to the full genome.

   Python 11 1

5. Bioassay-ML-Image-Classification Bioassay-ML-Image-Classification Public

   This repository contains a script for training a machine learning model to classify images into categories. The model is trained on custom images provided by the user.

   Jupyter Notebook 1

6. Swaney_etal_CobamidePaper Swaney_etal_CobamidePaper Public

   Code for data analysis and visualization in Swaney et al. mSystems 2022

   R