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result_rgeoda_lookup_1.txt
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====Run rgeoda local_moran using Natregimes and permutation_method=lookup-table
Reading layer `natregimes' from data source `/Users/xun/Github/libgeoda_paper/data/natregimes.shp' using driver `ESRI Shapefile'
Simple feature collection with 3085 features and 73 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: -124.7314 ymin: 24.95597 xmax: -66.96985 ymax: 49.37173
CRS: 4326
[1] "./data/natregimes.shp" "HR60" "999"
[4] "lookup-table" "1"
user system elapsed
0.061 0.001 0.061
Reading layer `natregimes' from data source `/Users/xun/Github/libgeoda_paper/data/natregimes.shp' using driver `ESRI Shapefile'
Simple feature collection with 3085 features and 73 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: -124.7314 ymin: 24.95597 xmax: -66.96985 ymax: 49.37173
CRS: 4326
[1] "./data/natregimes.shp" "HR60" "999"
[4] "lookup-table" "8"
user system elapsed
0.065 0.001 0.018
Reading layer `natregimes' from data source `/Users/xun/Github/libgeoda_paper/data/natregimes.shp' using driver `ESRI Shapefile'
Simple feature collection with 3085 features and 73 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: -124.7314 ymin: 24.95597 xmax: -66.96985 ymax: 49.37173
CRS: 4326
[1] "./data/natregimes.shp" "HR60" "999"
[4] "lookup-table" "16"
user system elapsed
0.089 0.003 0.016
Reading layer `natregimes' from data source `/Users/xun/Github/libgeoda_paper/data/natregimes.shp' using driver `ESRI Shapefile'
Simple feature collection with 3085 features and 73 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: -124.7314 ymin: 24.95597 xmax: -66.96985 ymax: 49.37173
CRS: 4326
[1] "./data/natregimes.shp" "HR60" "9999"
[4] "lookup-table" "1"
user system elapsed
0.526 0.001 0.528
Reading layer `natregimes' from data source `/Users/xun/Github/libgeoda_paper/data/natregimes.shp' using driver `ESRI Shapefile'
Simple feature collection with 3085 features and 73 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: -124.7314 ymin: 24.95597 xmax: -66.96985 ymax: 49.37173
CRS: 4326
[1] "./data/natregimes.shp" "HR60" "9999"
[4] "lookup-table" "8"
user system elapsed
0.534 0.003 0.081
Reading layer `natregimes' from data source `/Users/xun/Github/libgeoda_paper/data/natregimes.shp' using driver `ESRI Shapefile'
Simple feature collection with 3085 features and 73 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: -124.7314 ymin: 24.95597 xmax: -66.96985 ymax: 49.37173
CRS: 4326
[1] "./data/natregimes.shp" "HR60" "9999"
[4] "lookup-table" "16"
user system elapsed
0.834 0.013 0.070
Reading layer `natregimes' from data source `/Users/xun/Github/libgeoda_paper/data/natregimes.shp' using driver `ESRI Shapefile'
Simple feature collection with 3085 features and 73 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: -124.7314 ymin: 24.95597 xmax: -66.96985 ymax: 49.37173
CRS: 4326
[1] "./data/natregimes.shp" "HR60" "99999"
[4] "lookup-table" "1"
user system elapsed
4.947 0.007 4.954
Reading layer `natregimes' from data source `/Users/xun/Github/libgeoda_paper/data/natregimes.shp' using driver `ESRI Shapefile'
Simple feature collection with 3085 features and 73 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: -124.7314 ymin: 24.95597 xmax: -66.96985 ymax: 49.37173
CRS: 4326
[1] "./data/natregimes.shp" "HR60" "99999"
[4] "lookup-table" "8"
user system elapsed
5.267 0.031 0.695
Reading layer `natregimes' from data source `/Users/xun/Github/libgeoda_paper/data/natregimes.shp' using driver `ESRI Shapefile'
Simple feature collection with 3085 features and 73 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: -124.7314 ymin: 24.95597 xmax: -66.96985 ymax: 49.37173
CRS: 4326
[1] "./data/natregimes.shp" "HR60" "99999"
[4] "lookup-table" "16"
user system elapsed
8.034 0.043 0.549
====Run rgeoda local_moran using SDOH and permutation_method=lookup-table
Reading layer `us-sdoh-2014' from data source `/Users/xun/Github/libgeoda_paper/data/us-sdoh-2014.shp' using driver `ESRI Shapefile'
Simple feature collection with 71901 features and 25 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: -124.7625 ymin: 24.5231 xmax: -66.94989 ymax: 49.38436
CRS: 4326
[1] "./data/us-sdoh-2014.shp" "ep_unem"
[3] "999" "lookup-table"
[5] "1"
user system elapsed
2.182 0.003 2.185
Reading layer `us-sdoh-2014' from data source `/Users/xun/Github/libgeoda_paper/data/us-sdoh-2014.shp' using driver `ESRI Shapefile'
Simple feature collection with 71901 features and 25 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: -124.7625 ymin: 24.5231 xmax: -66.94989 ymax: 49.38436
CRS: 4326
[1] "./data/us-sdoh-2014.shp" "ep_unem"
[3] "999" "lookup-table"
[5] "8"
user system elapsed
2.444 0.010 0.432
Reading layer `us-sdoh-2014' from data source `/Users/xun/Github/libgeoda_paper/data/us-sdoh-2014.shp' using driver `ESRI Shapefile'
Simple feature collection with 71901 features and 25 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: -124.7625 ymin: 24.5231 xmax: -66.94989 ymax: 49.38436
CRS: 4326
[1] "./data/us-sdoh-2014.shp" "ep_unem"
[3] "999" "lookup-table"
[5] "16"
user system elapsed
3.325 0.009 0.345
Reading layer `us-sdoh-2014' from data source `/Users/xun/Github/libgeoda_paper/data/us-sdoh-2014.shp' using driver `ESRI Shapefile'
Simple feature collection with 71901 features and 25 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: -124.7625 ymin: 24.5231 xmax: -66.94989 ymax: 49.38436
CRS: 4326
[1] "./data/us-sdoh-2014.shp" "ep_unem"
[3] "9999" "lookup-table"
[5] "1"
user system elapsed
20.992 0.011 21.004
Reading layer `us-sdoh-2014' from data source `/Users/xun/Github/libgeoda_paper/data/us-sdoh-2014.shp' using driver `ESRI Shapefile'
Simple feature collection with 71901 features and 25 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: -124.7625 ymin: 24.5231 xmax: -66.94989 ymax: 49.38436
CRS: 4326
[1] "./data/us-sdoh-2014.shp" "ep_unem"
[3] "9999" "lookup-table"
[5] "8"
user system elapsed
22.776 0.039 3.039
Reading layer `us-sdoh-2014' from data source `/Users/xun/Github/libgeoda_paper/data/us-sdoh-2014.shp' using driver `ESRI Shapefile'
Simple feature collection with 71901 features and 25 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: -124.7625 ymin: 24.5231 xmax: -66.94989 ymax: 49.38436
CRS: 4326
[1] "./data/us-sdoh-2014.shp" "ep_unem"
[3] "9999" "lookup-table"
[5] "16"
user system elapsed
35.175 0.049 2.402
Reading layer `us-sdoh-2014' from data source `/Users/xun/Github/libgeoda_paper/data/us-sdoh-2014.shp' using driver `ESRI Shapefile'
Simple feature collection with 71901 features and 25 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: -124.7625 ymin: 24.5231 xmax: -66.94989 ymax: 49.38436
CRS: 4326
[1] "./data/us-sdoh-2014.shp" "ep_unem"
[3] "99999" "lookup-table"
[5] "1"
user system elapsed
373.784 0.154 373.949
Reading layer `us-sdoh-2014' from data source `/Users/xun/Github/libgeoda_paper/data/us-sdoh-2014.shp' using driver `ESRI Shapefile'
Simple feature collection with 71901 features and 25 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: -124.7625 ymin: 24.5231 xmax: -66.94989 ymax: 49.38436
CRS: 4326
[1] "./data/us-sdoh-2014.shp" "ep_unem"
[3] "99999" "lookup-table"
[5] "8"
user system elapsed
247.498 0.238 31.582
Reading layer `us-sdoh-2014' from data source `/Users/xun/Github/libgeoda_paper/data/us-sdoh-2014.shp' using driver `ESRI Shapefile'
Simple feature collection with 71901 features and 25 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: -124.7625 ymin: 24.5231 xmax: -66.94989 ymax: 49.38436
CRS: 4326
[1] "./data/us-sdoh-2014.shp" "ep_unem"
[3] "99999" "lookup-table"
[5] "16"
user system elapsed
360.602 0.492 23.572
====Run rgeoda local_moran using NYC and permutation_method=lookup-table
Reading layer `NYC_Area2010_2data' from data source `/Users/xun/Github/libgeoda_paper/data/NYC_Area2010_2data.shp' using driver `ESRI Shapefile'
Simple feature collection with 108487 features and 8 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: 1796733 ymin: 544070.8 xmax: 1991063 ymax: 677021.4
CRS: 102003
[1] "./data/NYC_Area2010_2data.shp" "CE01_02"
[3] "999" "lookup-table"
[5] "1"
user system elapsed
4.069 0.005 4.074
Reading layer `NYC_Area2010_2data' from data source `/Users/xun/Github/libgeoda_paper/data/NYC_Area2010_2data.shp' using driver `ESRI Shapefile'
Simple feature collection with 108487 features and 8 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: 1796733 ymin: 544070.8 xmax: 1991063 ymax: 677021.4
CRS: 102003
[1] "./data/NYC_Area2010_2data.shp" "CE01_02"
[3] "999" "lookup-table"
[5] "8"
user system elapsed
4.105 0.011 0.706
Reading layer `NYC_Area2010_2data' from data source `/Users/xun/Github/libgeoda_paper/data/NYC_Area2010_2data.shp' using driver `ESRI Shapefile'
Simple feature collection with 108487 features and 8 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: 1796733 ymin: 544070.8 xmax: 1991063 ymax: 677021.4
CRS: 102003
[1] "./data/NYC_Area2010_2data.shp" "CE01_02"
[3] "999" "lookup-table"
[5] "16"
user system elapsed
5.947 0.013 0.567
Reading layer `NYC_Area2010_2data' from data source `/Users/xun/Github/libgeoda_paper/data/NYC_Area2010_2data.shp' using driver `ESRI Shapefile'
Simple feature collection with 108487 features and 8 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: 1796733 ymin: 544070.8 xmax: 1991063 ymax: 677021.4
CRS: 102003
[1] "./data/NYC_Area2010_2data.shp" "CE01_02"
[3] "9999" "lookup-table"
[5] "1"
user system elapsed
37.726 0.018 37.748
Reading layer `NYC_Area2010_2data' from data source `/Users/xun/Github/libgeoda_paper/data/NYC_Area2010_2data.shp' using driver `ESRI Shapefile'
Simple feature collection with 108487 features and 8 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: 1796733 ymin: 544070.8 xmax: 1991063 ymax: 677021.4
CRS: 102003
[1] "./data/NYC_Area2010_2data.shp" "CE01_02"
[3] "9999" "lookup-table"
[5] "8"
user system elapsed
40.663 0.068 5.500
Reading layer `NYC_Area2010_2data' from data source `/Users/xun/Github/libgeoda_paper/data/NYC_Area2010_2data.shp' using driver `ESRI Shapefile'
Simple feature collection with 108487 features and 8 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: 1796733 ymin: 544070.8 xmax: 1991063 ymax: 677021.4
CRS: 102003
[1] "./data/NYC_Area2010_2data.shp" "CE01_02"
[3] "9999" "lookup-table"
[5] "16"
user system elapsed
63.470 0.080 4.387
Reading layer `NYC_Area2010_2data' from data source `/Users/xun/Github/libgeoda_paper/data/NYC_Area2010_2data.shp' using driver `ESRI Shapefile'
Simple feature collection with 108487 features and 8 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: 1796733 ymin: 544070.8 xmax: 1991063 ymax: 677021.4
CRS: 102003
[1] "./data/NYC_Area2010_2data.shp" "CE01_02"
[3] "99999" "lookup-table"
[5] "1"
user system elapsed
734.895 0.309 735.241
Reading layer `NYC_Area2010_2data' from data source `/Users/xun/Github/libgeoda_paper/data/NYC_Area2010_2data.shp' using driver `ESRI Shapefile'
Simple feature collection with 108487 features and 8 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: 1796733 ymin: 544070.8 xmax: 1991063 ymax: 677021.4
CRS: 102003
[1] "./data/NYC_Area2010_2data.shp" "CE01_02"
[3] "99999" "lookup-table"
[5] "8"
user system elapsed
546.297 0.405 68.873
Reading layer `NYC_Area2010_2data' from data source `/Users/xun/Github/libgeoda_paper/data/NYC_Area2010_2data.shp' using driver `ESRI Shapefile'
Simple feature collection with 108487 features and 8 fields
geometry type: MULTIPOLYGON
dimension: XY
bbox: xmin: 1796733 ymin: 544070.8 xmax: 1991063 ymax: 677021.4
CRS: 102003
[1] "./data/NYC_Area2010_2data.shp" "CE01_02"
[3] "99999" "lookup-table"
[5] "16"
user system elapsed
733.093 0.959 48.744
====Run rgeoda local_moran using Chicago_Parcels and permutation_method=lookup-table
Rscript perf_rgeoda.R ./data/Chicago_parcels_points.shp EstBuild 999 lookup-table 1
Rscript perf_rgeoda.R ./data/Chicago_parcels_points.shp EstBuild 999 lookup-table 8
Rscript perf_rgeoda.R ./data/Chicago_parcels_points.shp EstBuild 999 lookup-table 16
Rscript perf_rgeoda.R ./data/Chicago_parcels_points.shp EstBuild 9999 lookup-table 1
Rscript perf_rgeoda.R ./data/Chicago_parcels_points.shp EstBuild 9999 lookup-table 8
Rscript perf_rgeoda.R ./data/Chicago_parcels_points.shp EstBuild 9999 lookup-table 16
Rscript perf_rgeoda.R ./data/Chicago_parcels_points.shp EstBuild 99999 lookup-table 1
Rscript perf_rgeoda.R ./data/Chicago_parcels_points.shp EstBuild 99999 lookup-table 8
Rscript perf_rgeoda.R ./data/Chicago_parcels_points.shp EstBuild 99999 lookup-table 16
====Run rgeoda local_moran using Natregimes and permutation_method=lookup-table
Rscript perf_rgeoda.R ./data/natregimes.shp HR60 999 lookup-table 1
Rscript perf_rgeoda.R ./data/natregimes.shp HR60 999 lookup-table 8
Rscript perf_rgeoda.R ./data/natregimes.shp HR60 999 lookup-table 16
Rscript perf_rgeoda.R ./data/natregimes.shp HR60 9999 lookup-table 1
Rscript perf_rgeoda.R ./data/natregimes.shp HR60 9999 lookup-table 8
Rscript perf_rgeoda.R ./data/natregimes.shp HR60 9999 lookup-table 16
Rscript perf_rgeoda.R ./data/natregimes.shp HR60 99999 lookup-table 1
Rscript perf_rgeoda.R ./data/natregimes.shp HR60 99999 lookup-table 8
Rscript perf_rgeoda.R ./data/natregimes.shp HR60 99999 lookup-table 16
====Run rgeoda local_moran using SDOH and permutation_method=lookup-table
Rscript perf_rgeoda.R ./data/us-sdoh-2014.shp ep_unem 999 lookup-table 1
Rscript perf_rgeoda.R ./data/us-sdoh-2014.shp ep_unem 999 lookup-table 8
Rscript perf_rgeoda.R ./data/us-sdoh-2014.shp ep_unem 999 lookup-table 16
Rscript perf_rgeoda.R ./data/us-sdoh-2014.shp ep_unem 9999 lookup-table 1
Rscript perf_rgeoda.R ./data/us-sdoh-2014.shp ep_unem 9999 lookup-table 8
Rscript perf_rgeoda.R ./data/us-sdoh-2014.shp ep_unem 9999 lookup-table 16
Rscript perf_rgeoda.R ./data/us-sdoh-2014.shp ep_unem 99999 lookup-table 1
Rscript perf_rgeoda.R ./data/us-sdoh-2014.shp ep_unem 99999 lookup-table 8
Rscript perf_rgeoda.R ./data/us-sdoh-2014.shp ep_unem 99999 lookup-table 16
====Run rgeoda local_moran using NYC and permutation_method=lookup-table
Rscript perf_rgeoda.R ./data/NYC_Area2010_2data.shp CE01_02 999 lookup-table 1
Rscript perf_rgeoda.R ./data/NYC_Area2010_2data.shp CE01_02 999 lookup-table 8
Rscript perf_rgeoda.R ./data/NYC_Area2010_2data.shp CE01_02 999 lookup-table 16
Rscript perf_rgeoda.R ./data/NYC_Area2010_2data.shp CE01_02 9999 lookup-table 1
Rscript perf_rgeoda.R ./data/NYC_Area2010_2data.shp CE01_02 9999 lookup-table 8
Rscript perf_rgeoda.R ./data/NYC_Area2010_2data.shp CE01_02 9999 lookup-table 16
Rscript perf_rgeoda.R ./data/NYC_Area2010_2data.shp CE01_02 99999 lookup-table 1
Rscript perf_rgeoda.R ./data/NYC_Area2010_2data.shp CE01_02 99999 lookup-table 8
Rscript perf_rgeoda.R ./data/NYC_Area2010_2data.shp CE01_02 99999 lookup-table 16
====Run rgeoda local_moran using Chicago_Parcels and permutation_method=lookup-table
Reading layer `Chicago_parcels_points' from data source `/Users/xun/Github/libgeoda_paper/data/Chicago_parcels_points.shp' using driver `ESRI Shapefile'
Simple feature collection with 321701 features and 6 fields
geometry type: POINT
dimension: XY
bbox: xmin: -88.26351 ymin: 41.46987 xmax: -87.52488 ymax: 42.15398
geographic CRS: WGS 84
user system elapsed
5.345 0.104 5.450
[1] "./data/Chicago_parcels_points.shp" "EstBuild"
[3] "999" "lookup-table"
[5] "1"
user system elapsed
14.438 0.007 14.444
Reading layer `Chicago_parcels_points' from data source `/Users/xun/Github/libgeoda_paper/data/Chicago_parcels_points.shp' using driver `ESRI Shapefile'
Simple feature collection with 321701 features and 6 fields
geometry type: POINT
dimension: XY
bbox: xmin: -88.26351 ymin: 41.46987 xmax: -87.52488 ymax: 42.15398
geographic CRS: WGS 84
[1] "./data/Chicago_parcels_points.shp" "EstBuild"
[3] "999" "lookup-table"
[5] "8"
user system elapsed
15.988 0.031 2.531
Reading layer `Chicago_parcels_points' from data source `/Users/xun/Github/libgeoda_paper/data/Chicago_parcels_points.shp' using driver `ESRI Shapefile'
Simple feature collection with 321701 features and 6 fields
geometry type: POINT
dimension: XY
bbox: xmin: -88.26351 ymin: 41.46987 xmax: -87.52488 ymax: 42.15398
geographic CRS: WGS 84
[1] "./data/Chicago_parcels_points.shp" "EstBuild"
[3] "999" "lookup-table"
[5] "16"
user system elapsed
22.415 0.076 2.000
Reading layer `Chicago_parcels_points' from data source `/Users/xun/Github/libgeoda_paper/data/Chicago_parcels_points.shp' using driver `ESRI Shapefile'
Simple feature collection with 321701 features and 6 fields
geometry type: POINT
dimension: XY
bbox: xmin: -88.26351 ymin: 41.46987 xmax: -87.52488 ymax: 42.15398
geographic CRS: WGS 84
user system elapsed
5.436 0.120 5.557
[1] "./data/Chicago_parcels_points.shp" "EstBuild"
[3] "9999" "lookup-table"
[5] "1"
user system elapsed
136.703 0.056 136.772
Reading layer `Chicago_parcels_points' from data source `/Users/xun/Github/libgeoda_paper/data/Chicago_parcels_points.shp' using driver `ESRI Shapefile'
Simple feature collection with 321701 features and 6 fields
geometry type: POINT
dimension: XY
bbox: xmin: -88.26351 ymin: 41.46987 xmax: -87.52488 ymax: 42.15398
geographic CRS: WGS 84
[1] "./data/Chicago_parcels_points.shp" "EstBuild"
[3] "9999" "lookup-table"
[5] "8"
user system elapsed
154.407 0.077 19.948
Reading layer `Chicago_parcels_points' from data source `/Users/xun/Github/libgeoda_paper/data/Chicago_parcels_points.shp' using driver `ESRI Shapefile'
Simple feature collection with 321701 features and 6 fields
geometry type: POINT
dimension: XY
bbox: xmin: -88.26351 ymin: 41.46987 xmax: -87.52488 ymax: 42.15398
geographic CRS: WGS 84
[1] "./data/Chicago_parcels_points.shp" "EstBuild"
[3] "9999" "lookup-table"
[5] "16"
user system elapsed
233.895 0.421 15.488
Reading layer `Chicago_parcels_points' from data source `/Users/xun/Github/libgeoda_paper/data/Chicago_parcels_points.shp' using driver `ESRI Shapefile'
Simple feature collection with 321701 features and 6 fields
geometry type: POINT
dimension: XY
bbox: xmin: -88.26351 ymin: 41.46987 xmax: -87.52488 ymax: 42.15398
geographic CRS: WGS 84
user system elapsed
5.486 0.128 5.615
[1] "./data/Chicago_parcels_points.shp" "EstBuild"
[3] "99999" "lookup-table"
[5] "1"
user system elapsed
1356.553 0.527 1357.252
Reading layer `Chicago_parcels_points' from data source `/Users/xun/Github/libgeoda_paper/data/Chicago_parcels_points.shp' using driver `ESRI Shapefile'
Simple feature collection with 321701 features and 6 fields
geometry type: POINT
dimension: XY
bbox: xmin: -88.26351 ymin: 41.46987 xmax: -87.52488 ymax: 42.15398
geographic CRS: WGS 84
[1] "./data/Chicago_parcels_points.shp" "EstBuild"
[3] "99999" "lookup-table"
[5] "8"
user system elapsed
1535.342 0.459 193.110
Reading layer `Chicago_parcels_points' from data source `/Users/xun/Github/libgeoda_paper/data/Chicago_parcels_points.shp' using driver `ESRI Shapefile'
Simple feature collection with 321701 features and 6 fields
geometry type: POINT
dimension: XY
bbox: xmin: -88.26351 ymin: 41.46987 xmax: -87.52488 ymax: 42.15398
geographic CRS: WGS 84
[1] "./data/Chicago_parcels_points.shp" "EstBuild"
[3] "99999" "lookup-table"
[5] "16"
user system elapsed
2287.964 1.118 148.234