Merge pull request #258 from cacraigucar/cam_sima_testing

Introduce limited CAM-SIMA regression testing

cime_config/testdefs/testlist_cam.xml

@@ -0,0 +1,52 @@
+<?xml version="1.0"?>
+<testlist version="2.0">
+
+<!--              @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@                -->
+<!--                      SIMA TESTS                                    -->
+<!--              @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@                -->
+
+
+  <test compset="FPHYStest" grid="ne3pg3_ne3pg3_mg37" name="SMS_Ln2" testmods="cam/outfrq_kessler_derecho_nooutput/">
+    <machines>
+      <machine name="derecho" compiler="intel" category="aux_sima"/>
+    </machines>
+    <options>
+      <option name="wallclock">00:10:00</option>
+    </options>
+  </test>
+  <test compset="FKESSLER" grid="mpasa480_mpasa480" name="SMS_Ln2" testmods="cam/outfrq_kessler_mpas_derecho_nooutput/">
+    <machines>
+      <machine name="derecho" compiler="gnu" category="aux_sima"/>
+    </machines>
+    <options>
+      <option name="wallclock">00:10:00</option>
+    </options>
+  </test>
+  <test compset="FPHYStest" grid="ne3pg3_ne3pg3_mg37" name="SMS_Ln2" testmods="cam/outfrq_held_suarez_derecho_nooutput/">
+    <machines>
+      <machine name="derecho" compiler="gnu" category="aux_sima"/>
+    </machines>
+    <options>
+      <option name="wallclock">00:10:00</option>
+    </options>
+  </test>
+
+  <test compset="FPHYStest" grid="ne3pg3_ne3pg3_mg37" name="SMS_Ln2" testmods="cam/outfrq_kessler_izumi_nooutput/">
+    <machines>
+      <machine name="izumi" compiler="gnu" category="aux_sima"/>
+    </machines>
+    <options>
+      <option name="wallclock">00:10:00</option>
+    </options>
+  </test>
+  <test compset="FPHYStest" grid="ne3pg3_ne3pg3_mg37" name="SMS_Ln2" testmods="cam/outfrq_held_suarez_izumi_nooutput/">
+    <machines>
+      <machine name="izumi" compiler="gnu" category="aux_sima"/>
+    </machines>
+    <options>
+      <option name="wallclock">00:10:00</option>
+    </options>
+  </test>
+
+
+</testlist>

cime_config/testdefs/testmods_dirs/cam/outfrq_held_suarez_derecho_nooutput/shell_commands

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+ ./xmlchange CAM_CONFIG_OPTS="--dyn none --physics-suites held_suarez_1994"

cime_config/testdefs/testmods_dirs/cam/outfrq_held_suarez_derecho_nooutput/user_nl_cam

@@ -0,0 +1,4 @@
+ncdata=/glade/campaign/cesm/community/amwg/sima_baselines/cam_sima_test_snapshots/cam_ne3pg3_held_suarez_snapshot_derecho_gnu_before.nc
+ncdata_check=/glade/campaign/cesm/community/amwg/sima_baselines/cam_sima_test_snapshots/cam_ne3pg3_held_suarez_snapshot_derecho_gnu_after.nc
+debug_output=0
+pver=30

cime_config/testdefs/testmods_dirs/cam/outfrq_held_suarez_izumi_nooutput/shell_commands

@@ -0,0 +1 @@
+ ./xmlchange CAM_CONFIG_OPTS="--dyn none --physics-suites held_suarez_1994"

cime_config/testdefs/testmods_dirs/cam/outfrq_held_suarez_izumi_nooutput/user_nl_cam

@@ -0,0 +1,4 @@
+ncdata=/project/amp02/cam_snapshot_files/held_suarez/cam_ne3pg3_held_suarez_snapshot_derecho_gnu_before.nc
+ncdata_check=/project/amp02/cam_snapshot_files/held_suarez/cam_ne3pg3_held_suarez_snapshot_derecho_gnu_after.nc
+debug_output=0
+pver=30

cime_config/testdefs/testmods_dirs/cam/outfrq_kessler_derecho_nooutput/shell_commands

@@ -0,0 +1 @@
+ ./xmlchange CAM_CONFIG_OPTS="--dyn none --physics-suites kessler"

cime_config/testdefs/testmods_dirs/cam/outfrq_kessler_derecho_nooutput/user_nl_cam

@@ -0,0 +1,4 @@
+ncdata=/glade/campaign/cesm/community/amwg/sima_baselines/cam_sima_test_snapshots/cam_ne3pg3_kessler_snapshot_derecho_gnu_before.nc
+ncdata_check=/glade/campaign/cesm/community/amwg/sima_baselines/cam_sima_test_snapshots/cam_ne3pg3_kessler_snapshot_derecho_gnu_after.nc
+debug_output=0
+pver=30

cime_config/testdefs/testmods_dirs/cam/outfrq_kessler_izumi_nooutput/shell_commands

@@ -0,0 +1 @@
+ ./xmlchange CAM_CONFIG_OPTS="--dyn none --physics-suites kessler"

cime_config/testdefs/testmods_dirs/cam/outfrq_kessler_izumi_nooutput/user_nl_cam

@@ -0,0 +1,4 @@
+ncdata=/project/amp02/cam_snapshot_files/kessler/cam_ne3pg3_kessler_snapshot_derecho_gnu_before.nc
+ncdata_check=/project/amp02/cam_snapshot_files/kessler/cam_ne3pg3_kessler_snapshot_derecho_gnu_after.nc
+debug_output=0
+pver=30

cime_config/testdefs/testmods_dirs/cam/outfrq_kessler_mpas_derecho_nooutput/shell_commands

@@ -0,0 +1 @@
+ ./xmlchange CAM_LINKED_LIBS="-lmpas"

cime_config/testdefs/testmods_dirs/cam/outfrq_kessler_mpas_derecho_nooutput/user_nl_cam

@@ -0,0 +1 @@
+debug_output=0

test/system/TGIT.sh

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+#!/bin/sh
+# Test for bad git repo
+# Ensures that the top-level CAM directory 
+# has ".git" directory and ".gitignore" file,
+# and no other git files or directories.
+
+# Return codes in use:
+# 1: Not a git repository
+# 2: Missing ".git" directory
+# 3: Missing ".gitignore" file
+# 4: Missing ".github" directory
+# 5: More than three ".git*" files or directories
+# 6: Error from running an external command
+
+# Utility to check return code.
+# Give it the code and an error message, and it will print stuff and exit.
+check_code () {
+    if [ "$1" -ne 0 ]; then
+        echo "Error: return code from command was $1"
+        echo "$2"
+        exit 6
+    fi
+}
+
+# Little utility for finding absolute path to a directory.
+get_dir_abspath () {
+    echo $(cd $1 && pwd)
+}
+
+# Set CAM top-level directory:
+cam_top_dir=$(get_dir_abspath ${CAM_ROOT})
+
+# Initialize error variable:
+rc=0
+
+# Check to make sure that the top level directory is a git repo:
+top_dir_gitinfo=$(git -C "${cam_top_dir}" rev-parse)
+
+# Save error code:
+gitinfo_error=$?
+
+# Print error if directory is not a git repository:
+if [ "${gitinfo_error}" -ne 0 ]; then
+    cat <<EOF
+The top directory does not appear to be a git repository. Make sure:
+1) Git is present on your system and PATH (i.e. "git" exists as a command in your shell).
+2) You are running these tests on the correct directory, and
+3) The sub-directory ".git" exists in the directory (if not then copy it from a proper CAM git repo).
+EOF
+    rc=1
+else # If directory is a git repoistory, then run other tests:
+
+    # Check for ".git" directory (i.e., make sure git repo isn't "bare"):
+    if [ ! -d "${cam_top_dir}/.git" ]; then
+        cat <<EOF
+The ".git" directory is missing from the CAM git repo.  Was this repo cloned, copied, or
+modified incorrectly?  If so then copy the .git directory from a standard CAM git repo.
+EOF
+        rc=2
+    fi
+
+    # Check for ".gitignore" file:
+    if [ ! -f "${cam_top_dir}/.gitignore" ]; then
+        cat <<EOF
+The ".gitignore" file is missing from the CAM git repo.  Was this repo cloned, copied, or
+modified incorrectly?  If so then copy the .gitignore file from a standard CAM git repo.
+EOF
+        rc=3
+    fi   
+
+    # Check for ".github" directory:
+    if [ ! -d "${cam_top_dir}/.github" ]; then
+        cat <<EOF
+The ".github" directory is missing from the CAM git repo.  Was this repo cloned, copied, or
+modified incorrectly?  If so then copy the .github directory from a standard CAM git repo.
+EOF
+        rc=4
+    fi
+
+    # Check if there are more ".git*" files or directories than just ".git", ".gitignore",
+    # and ".github":
+    git_file_num=$(find "${cam_top_dir}" -maxdepth 1 -name '.git*' | wc -l)
+
+    check_code "$?" "Problem running 'find' command for multi-git file check."
+
+    if [ "${git_file_num}" -gt 3 ]; then
+        cat <<EOF
+More than three ".git*" files or sub-directories present in this CAM git repo.
+EOF
+        rc=5
+    fi
+
+fi # git-repo check
+
+# If all tests pass, let user know:
+if [ "$rc" -eq 0 ]; then
+    echo "No problems found in the git repostiory ($cam_top_dir)."
+fi
+
+# Exit script with final error value:
+exit $rc

test/system/TR8.sh

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+#!/bin/sh
+# Test for missing r8
+#
+
+
+# Check physics
+if [ -d "${CAM_ROOT}/components/cam" ]; then
+
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/components/cam/src/physics/cam
+rc=$?
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/components/cam/src/physics/camrt
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/components/cam/src/physics/rrtmg -s aer_src
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/components/cam/src/physics/simple
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/components/cam/src/physics/waccm
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/components/cam/src/physics/waccmx
+rc=`expr $? + $rc`
+
+else
+
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/src/physics/cam
+rc=$?
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/src/physics/camrt
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/src/physics/rrtmg -s aer_src
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/src/physics/simple
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/src/physics/waccm
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/src/physics/waccmx
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/src/infrastructure
+rc=`expr $? + $rc`
+
+fi
+
+#Check Ionosphere
+if [ -d "${CAM_ROOT}/components/cam" ]; then
+
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/components/cam/src/ionosphere
+rc=`expr $? + $rc`
+
+else
+
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/src/ionosphere
+rc=`expr $? + $rc`
+
+fi
+
+#Check Chemistry
+if [ -d "${CAM_ROOT}/components/cam" ]; then
+
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/components/cam/src/chemistry -s geoschem
+rc=`expr $? + $rc`
+
+else
+
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/src/chemistry -s geoschem
+rc=`expr $? + $rc`
+
+fi
+
+#Check Dynamics
+if [ -d "${CAM_ROOT}/components/cam" ]; then
+
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/components/cam/src/dynamics/fv3 -s atmos_cubed_sphere,microphys
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/components/cam/src/dynamics/se
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/components/cam/src/dynamics/fv
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/components/cam/src/dynamics/eul
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/components/cam/src/dynamics/mpas -s dycore
+rc=`expr $? + $rc`
+
+else
+
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/src/dynamics/fv3 -s atmos_cubed_sphere,microphys
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/src/dynamics/se
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/src/dynamics/fv
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/src/dynamics/eul
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/src/dynamics/mpas -s dycore
+rc=`expr $? + $rc`
+
+fi
+
+#Check other
+if [ -d "${CAM_ROOT}/components/cam" ]; then
+
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/components/cam/src/advection
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/components/cam/src/control
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/components/cam/src/utils
+rc=`expr $? + $rc`
+
+else
+
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/src/advection
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/src/control
+rc=`expr $? + $rc`
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/src/utils
+rc=`expr $? + $rc`
+
+fi
+
+#Check coupler
+if [ -d "${CAM_ROOT}/components/cam" ]; then
+
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/components/cam/src/cpl
+rc=`expr $? + $rc`
+
+
+
+else
+
+ruby $ADDREALKIND_EXE -r r8 -l 1 -d $CAM_ROOT/src/cpl
+rc=`expr $? + $rc`
+
+fi
+
+echo $rc
+
+if [ $rc = 255 ]; then
+   rc=1
+fi
+
+
+
+echo $rc
+exit $rc