Merge pull request #828 from EBISPOT/update-api-fields-tests

TESTS - Update ontolog_purl and mailing_list fields

testcases/defined-fields/labelSingle.json

@@ -3,7 +3,8 @@
     {
       "id": "labelSingle",
       "preferredPrefix": "labelSingle",
-      "ontology_purl": "./testcases/defined-fields/labelSingle.owl"
+      "ontology_purl": "./testcases/defined-fields/labelSingle.owl",
+      "mailing_list": "help@ols.ebi.ac.uk"
     }
   ]
 }

testcases_expected_output/annotation-properties/gitIssue502/gitissue502_ontologies.csv

@@ -1,2 +1,2 @@
-"id:ID",":LABEL","_json","iri","numberOfIndividuals:string[]","linkedEntities:string[]","ontology_purl:string[]","numDescendants:string[]","numberOfProperties:string[]","numberOfClasses:string[]","language:string[]","numHierarchicalDescendants:string[]","isObsolete:string[]","importsFrom:string[]","type:string[]","preferredPrefix:string[]","directAncestor:string[]","exportsTo:string[]","imported:string[]","numberOfEntities:string[]","ontologyId:string[]","http__//www.w3.org/1999/02/22-rdf-syntax-ns#type:string[]"
-"gitissue502+ontology+http://purl.obolibrary.org/obo/mondo.owl","Ontology","{""ontologyId"":""gitissue502"",""importsFrom"":[""oio"",""skos"",""rdfs""],""exportsTo"":[],""iri"":""http://purl.obolibrary.org/obo/mondo.owl"",""preferredPrefix"":""gitIssue502"",""ontology_purl"":""./testcases/annotation-properties/gitIssue502.owl"",""type"":[""ontology""],""directAncestor"":[],""http://www.w3.org/1999/02/22-rdf-syntax-ns#type"":""http://www.w3.org/2002/07/owl#Ontology"",""imported"":false,""isObsolete"":false,""language"":[{""type"":[""literal""],""value"":""en""}],""numDescendants"":0.0,""numHierarchicalDescendants"":0.0,""numberOfClasses"":{""type"":[""literal""],""value"":""249""},""numberOfEntities"":{""type"":[""literal""],""value"":""412""},""numberOfIndividuals"":{""type"":[""literal""],""value"":""0""},""numberOfProperties"":{""type"":[""literal""],""value"":""163""},""searchableAnnotationValues"":[false,{""type"":[""literal""],""value"":""249""},{""type"":[""literal""],""value"":""412""},{""type"":[""literal""],""value"":""0""},{""type"":[""literal""],""value"":""163""}],""linkedEntities"":{}}","http://purl.obolibrary.org/obo/mondo.owl","0","","./testcases/annotation-properties/gitIssue502.owl","0.0","163","249","en","0.0","false","oio|skos|rdfs","ontology","gitIssue502","","","false","412","gitissue502","http://www.w3.org/2002/07/owl#Ontology"
+"id:ID",":LABEL","_json","iri","numberOfIndividuals:string[]","linkedEntities:string[]","numDescendants:string[]","numberOfProperties:string[]","numberOfClasses:string[]","language:string[]","numHierarchicalDescendants:string[]","isObsolete:string[]","importsFrom:string[]","type:string[]","ontologyPurl:string[]","preferredPrefix:string[]","directAncestor:string[]","exportsTo:string[]","imported:string[]","numberOfEntities:string[]","ontologyId:string[]","http__//www.w3.org/1999/02/22-rdf-syntax-ns#type:string[]"
+"gitissue502+ontology+http://purl.obolibrary.org/obo/mondo.owl","Ontology","{""ontologyId"":""gitissue502"",""importsFrom"":[""oio"",""skos"",""rdfs""],""exportsTo"":[],""iri"":""http://purl.obolibrary.org/obo/mondo.owl"",""preferredPrefix"":""gitIssue502"",""ontologyPurl"":""./testcases/annotation-properties/gitIssue502.owl"",""type"":[""ontology""],""directAncestor"":[],""http://www.w3.org/1999/02/22-rdf-syntax-ns#type"":""http://www.w3.org/2002/07/owl#Ontology"",""imported"":false,""isObsolete"":false,""language"":[{""type"":[""literal""],""value"":""en""}],""numDescendants"":0.0,""numHierarchicalDescendants"":0.0,""numberOfClasses"":{""type"":[""literal""],""value"":""249""},""numberOfEntities"":{""type"":[""literal""],""value"":""412""},""numberOfIndividuals"":{""type"":[""literal""],""value"":""0""},""numberOfProperties"":{""type"":[""literal""],""value"":""163""},""searchableAnnotationValues"":[false,{""type"":[""literal""],""value"":""249""},{""type"":[""literal""],""value"":""412""},{""type"":[""literal""],""value"":""0""},{""type"":[""literal""],""value"":""163""}],""linkedEntities"":{}}","http://purl.obolibrary.org/obo/mondo.owl","0","","0.0","163","249","en","0.0","false","oio|skos|rdfs","ontology","./testcases/annotation-properties/gitIssue502.owl","gitIssue502","","","false","412","gitissue502","http://www.w3.org/2002/07/owl#Ontology"

testcases_expected_output/annotation-properties/gitIssue502/oio_ontologies.csv

@@ -1,5 +1,5 @@
-"id:ID",":LABEL","_json","iri","numberOfIndividuals:string[]","linkedEntities:string[]","ontology_purl:string[]","numDescendants:string[]","numberOfProperties:string[]","numberOfClasses:string[]","language:string[]","numHierarchicalDescendants:string[]","isObsolete:string[]","label:string[]","importsFrom:string[]","type:string[]","directAncestor:string[]","exportsTo:string[]","baseUri:string[]","http__//www.w3.org/2000/01/rdf-schema#comment:string[]","imported:string[]","numberOfEntities:string[]","ontologyId:string[]","http__//www.w3.org/2000/01/rdf-schema#label:string[]","definition:string[]","http__//www.w3.org/1999/02/22-rdf-syntax-ns#type:string[]"
-"oio+ontology+http://www.geneontology.org/formats/oboInOwl","Ontology","{""ontologyId"":""oio"",""importsFrom"":[],""exportsTo"":[""gitissue502""],""iri"":""http://www.geneontology.org/formats/oboInOwl"",""ontology_purl"":""./testcases/annotation-properties/oboInOwl.owl"",""baseUri"":[""http://www.geneontology.org/formats/oboInOwl#""],""type"":[""ontology""],""definition"":[{""type"":[""literal""],""value"":""OBO Format metamodel. This meta-ontology is self-describing. OBO metamodel properties are described using OBO metamodel properties""},{""type"":[""literal""],""value"":""\n          This is an OWL translation of an ontology whose native representational form is .obo. The translation was performed using the oboInOwl xslt library. For details, see http://www.berkeleybop.org/obo-conv.cgi\n        ""}],""directAncestor"":[],""http://www.w3.org/1999/02/22-rdf-syntax-ns#type"":""http://www.w3.org/2002/07/owl#Ontology"",""http://www.w3.org/2000/01/rdf-schema#comment"":[{""type"":[""literal""],""value"":""OBO Format metamodel. This meta-ontology is self-describing. OBO metamodel properties are described using OBO metamodel properties""},{""type"":[""literal""],""value"":""\n          This is an OWL translation of an ontology whose native representational form is .obo. The translation was performed using the oboInOwl xslt library. For details, see http://www.berkeleybop.org/obo-conv.cgi\n        ""}],""http://www.w3.org/2000/01/rdf-schema#label"":{""type"":[""literal""],""value"":""""},""imported"":false,""isObsolete"":false,""label"":[{""type"":[""literal""],""value"":""""}],""language"":[{""type"":[""literal""],""value"":""en""}],""numDescendants"":0.0,""numHierarchicalDescendants"":0.0,""numberOfClasses"":{""type"":[""literal""],""value"":""12""},""numberOfEntities"":{""type"":[""literal""],""value"":""56""},""numberOfIndividuals"":{""type"":[""literal""],""value"":""0""},""numberOfProperties"":{""type"":[""literal""],""value"":""44""},""searchableAnnotationValues"":[false,{""type"":[""literal""],""value"":""12""},{""type"":[""literal""],""value"":""56""},{""type"":[""literal""],""value"":""0""},{""type"":[""literal""],""value"":""44""}],""linkedEntities"":{""http://www.w3.org/2000/01/rdf-schema#comment"":{""definedBy"":[""rdfs""],""numAppearsIn"":2.0,""hasLocalDefinition"":false,""label"":[{""type"":[""literal""],""value"":""comment""}],""curie"":{""type"":[""literal""],""value"":""RDFS:comment""},""type"":[""property"",""entity""]},""http://www.w3.org/2000/01/rdf-schema#label"":{""definedBy"":[""rdfs""],""numAppearsIn"":3.0,""hasLocalDefinition"":false,""label"":[{""type"":[""literal""],""value"":""label""}],""curie"":{""type"":[""literal""],""value"":""RDFS:label""},""type"":[""property"",""entity""]}}}","http://www.geneontology.org/formats/oboInOwl","0","","./testcases/annotation-properties/oboInOwl.owl","0.0","44","12","en","0.0","false","","","ontology","","gitissue502","http://www.geneontology.org/formats/oboInOwl#","OBO Format metamodel. This meta-ontology is self-describing. OBO metamodel properties are described using OBO metamodel properties|
+"id:ID",":LABEL","_json","iri","numberOfIndividuals:string[]","linkedEntities:string[]","numDescendants:string[]","numberOfProperties:string[]","numberOfClasses:string[]","language:string[]","numHierarchicalDescendants:string[]","isObsolete:string[]","label:string[]","importsFrom:string[]","type:string[]","ontologyPurl:string[]","directAncestor:string[]","exportsTo:string[]","baseUri:string[]","http__//www.w3.org/2000/01/rdf-schema#comment:string[]","imported:string[]","numberOfEntities:string[]","ontologyId:string[]","http__//www.w3.org/2000/01/rdf-schema#label:string[]","definition:string[]","http__//www.w3.org/1999/02/22-rdf-syntax-ns#type:string[]"
+"oio+ontology+http://www.geneontology.org/formats/oboInOwl","Ontology","{""ontologyId"":""oio"",""importsFrom"":[],""exportsTo"":[""gitissue502""],""iri"":""http://www.geneontology.org/formats/oboInOwl"",""ontologyPurl"":""./testcases/annotation-properties/oboInOwl.owl"",""baseUri"":[""http://www.geneontology.org/formats/oboInOwl#""],""type"":[""ontology""],""definition"":[{""type"":[""literal""],""value"":""OBO Format metamodel. This meta-ontology is self-describing. OBO metamodel properties are described using OBO metamodel properties""},{""type"":[""literal""],""value"":""\n          This is an OWL translation of an ontology whose native representational form is .obo. The translation was performed using the oboInOwl xslt library. For details, see http://www.berkeleybop.org/obo-conv.cgi\n        ""}],""directAncestor"":[],""http://www.w3.org/1999/02/22-rdf-syntax-ns#type"":""http://www.w3.org/2002/07/owl#Ontology"",""http://www.w3.org/2000/01/rdf-schema#comment"":[{""type"":[""literal""],""value"":""OBO Format metamodel. This meta-ontology is self-describing. OBO metamodel properties are described using OBO metamodel properties""},{""type"":[""literal""],""value"":""\n          This is an OWL translation of an ontology whose native representational form is .obo. The translation was performed using the oboInOwl xslt library. For details, see http://www.berkeleybop.org/obo-conv.cgi\n        ""}],""http://www.w3.org/2000/01/rdf-schema#label"":{""type"":[""literal""],""value"":""""},""imported"":false,""isObsolete"":false,""label"":[{""type"":[""literal""],""value"":""""}],""language"":[{""type"":[""literal""],""value"":""en""}],""numDescendants"":0.0,""numHierarchicalDescendants"":0.0,""numberOfClasses"":{""type"":[""literal""],""value"":""12""},""numberOfEntities"":{""type"":[""literal""],""value"":""56""},""numberOfIndividuals"":{""type"":[""literal""],""value"":""0""},""numberOfProperties"":{""type"":[""literal""],""value"":""44""},""searchableAnnotationValues"":[false,{""type"":[""literal""],""value"":""12""},{""type"":[""literal""],""value"":""56""},{""type"":[""literal""],""value"":""0""},{""type"":[""literal""],""value"":""44""}],""linkedEntities"":{""http://www.w3.org/2000/01/rdf-schema#comment"":{""definedBy"":[""rdfs""],""numAppearsIn"":2.0,""hasLocalDefinition"":false,""label"":[{""type"":[""literal""],""value"":""comment""}],""curie"":{""type"":[""literal""],""value"":""RDFS:comment""},""type"":[""property"",""entity""]},""http://www.w3.org/2000/01/rdf-schema#label"":{""definedBy"":[""rdfs""],""numAppearsIn"":3.0,""hasLocalDefinition"":false,""label"":[{""type"":[""literal""],""value"":""label""}],""curie"":{""type"":[""literal""],""value"":""RDFS:label""},""type"":[""property"",""entity""]}}}","http://www.geneontology.org/formats/oboInOwl","0","","0.0","44","12","en","0.0","false","","","ontology","./testcases/annotation-properties/oboInOwl.owl","","gitissue502","http://www.geneontology.org/formats/oboInOwl#","OBO Format metamodel. This meta-ontology is self-describing. OBO metamodel properties are described using OBO metamodel properties|
           This is an OWL translation of an ontology whose native representational form is .obo. The translation was performed using the oboInOwl xslt library. For details, see http://www.berkeleybop.org/obo-conv.cgi
         ","false","56","oio","","OBO Format metamodel. This meta-ontology is self-describing. OBO metamodel properties are described using OBO metamodel properties|
           This is an OWL translation of an ontology whose native representational form is .obo. The translation was performed using the oboInOwl xslt library. For details, see http://www.berkeleybop.org/obo-conv.cgi