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data and code repo for the follow-up Liver Disease Micriobiome paper at DFI Uchicago

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DFI-Bioinformatics/DFILiverDiseaseMicrobiome2

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Data Repo for Fecal butyrate and deoxycholic acid concentrations correlate with mortality in hospitalized patients with liver disease

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  1. code: contains all R scripts for generating heatmap, volcano plots and/or taxonomy barplots, etc. Scripts are organized by number. Resultant plots are labeled with same number as the script.
  2. results: contains all unmodified graphs in PDF format. Graphs published along with the paper have been slightly rearranged and beautified in Adobe Illustrator.
  3. data: contains raw or derived data or template files

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data and code repo for the follow-up Liver Disease Micriobiome paper at DFI Uchicago

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