-
Notifications
You must be signed in to change notification settings - Fork 6
/
Copy path__init__.py
105 lines (97 loc) · 4.95 KB
/
__init__.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
###############################################################################
# #
# # Copyright (C) 2010-2012, USGS Fort Collins Science Center.
# # All rights reserved.
# # Contact: talbertc@usgs.gov
# #
# # This file is part of the Software for Assisted Habitat Modeling package
# # for VisTrails.
# #
# # "Redistribution and use in source and binary forms, with or without
# # modification, are permitted provided that the following conditions are met:
# #
# # - Redistributions of source code must retain the above copyright notice,
# # this list of conditions and the following disclaimer.
# # - Redistributions in binary form must reproduce the above copyright
# # notice, this list of conditions and the following disclaimer in the
# # documentation and/or other materials provided with the distribution.
# # - Neither the name of the University of Utah nor the names of its
# # contributors may be used to endorse or promote products derived from
# # this software without specific prior written permission.
# #
# # THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
# # AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
# # THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
# # PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
# # CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
# # EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
# # PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
# # OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
# # WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
# # OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# # ADVISED OF THE POSSIBILITY OF SUCH DAMAGE."
# #
# # Although this program has been used by the U.S. Geological Survey (USGS),
# # no warranty, expressed or implied, is made by the USGS or the
# # U.S. Government as to the accuracy and functioning of the program and
# # related program material nor shall the fact of distribution constitute
# # any such warranty, and no responsibility is assumed by the USGS
# # in connection therewith.
# #
# # Any use of trade, firm, or product names is for descriptive purposes only
# # and does not imply endorsement by the U.S. Government.
###############################################################################
import sys
from vistrails.core import system
from vistrails.core.configuration import ConfigurationObject
name = "SAHM"
identifier = "gov.usgs.sahm"
version = '2.0.0'
def package_dependencies():
import vistrails.core.packagemanager
manager = vistrails.core.packagemanager.get_package_manager()
if manager.has_package('org.vistrails.vistrails.spreadsheet'):
return ['org.vistrails.vistrails.spreadsheet']
else:
return []
def package_requirements():
try:
from vistrails.core.requirements import python_module_exists, MissingRequirement
except ImportError:
from core.requirements import python_module_exists, MissingRequirement
if not python_module_exists('matplotlib'):
raise MissingRequirement('matplotlib')
if not python_module_exists('fiona'):
raise MissingRequirement('fiona')
if not python_module_exists('numpy'):
raise MissingRequirement('numpy')
if not python_module_exists('osgeo'):
raise MissingRequirement('osgeo')
if not python_module_exists('shapely'):
raise MissingRequirement('shapely')
if not python_module_exists('pyproj'):
raise MissingRequirement('pyproj')
if not python_module_exists('scipy'):
raise MissingRequirement('scipy')
if system.systemType in ['Microsoft', 'Windows']:
# on Windows the default location of these is relative to the python.exe
pyloc = sys.executable
configuration = \
ConfigurationObject(output_dir=r'C:\temp\SAHM_workspace',
r_path=r'Central_R\R-3.2.0\bin',
maxent_path=r'Not Set',
java_path=r'java',
cur_session_folder=r"C:\temp\SAHM_workspace",
cur_processing_mode="multiple models simultaneously (1 core each)",
default_seed='1234',
verbose='True')
else:
configuration = \
ConfigurationObject(output_dir=r'C:\temp\SAHM_workspace',
r_path=r'Not Set',
maxent_path=r'Not Set',
java_path=r'java',
cur_session_folder=r"C:\temp\SAHM_workspace",
cur_processing_mode="multiple models simultaneously (1 core each)",
default_seed='1234',
verbose='True')