DNAfusion 1.2.0 (5 April 2023)

Added introns_ALK_EML4()
Added find_variants()
Updated break_position_depth()
Updated break_position()
Refined EML4_ALK_detection()
Updated vignette to include new functions
Cleaned functions for Bioconductor 3.17 release

DNAfusion 1.1.1 (6 March 2023)

Updated example files to include ALK reads

DNAfusion 1.1.0 (13 December 2022)

Updated DESCRIPTION

DNAfusion 1.0.0 (19 October 2022)

Bioconductor 3.16 release

DNAfusion 0.99.3 (16 October 2022)

Updated DESCRIPTION

DNAfusion 0.99.2 (14 Octoboer 2022)

Review from Bioconductor

DNAfusion 0.99.1 (12 September 2022)

Changed the output of EML4_ALK_detection() from data.frame to GAlignments object
Adjusted the other functions, vignettes, tests and man accordingly

DNAfusion 0.99.0 (31 August 2022)

DNAfusion takes BAM file as input and identifies EML4-ALK gene fusions
Submitted to Bioconductor.