Build duckdb database and archive #120
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| name: Build duckdb database and archive | |
| on: | |
| push: | |
| branches: | |
| - main | |
| workflow_dispatch: | |
| schedule: | |
| - cron: '0 6 * * *' | |
| defaults: | |
| run: | |
| shell: bash -leo pipefail {0} | |
| jobs: | |
| # job 1 | |
| setup-and-build: | |
| name: "Setup dependencies" | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v3 | |
| - name: Install mamba | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| environment-file: environment.yml | |
| activate-environment: dictionary | |
| - name: Install duckdb | |
| uses: opt-nc/setup-duckdb-action@v1.0.9 | |
| - name: Install quarto | |
| uses: quarto-dev/quarto-actions/setup@v2 | |
| - name: Test installations | |
| env: | |
| AIRTABLE_API_KEY: ${{ secrets.AIRTABLE_API_KEY }} | |
| MOTHERDUCK_TOKEN: ${{ secrets.MOTHERDUCK_TOKEN }} | |
| run: | | |
| echo -n "snakemake: " && snakemake --version | |
| echo -n "python: " && python --version | |
| echo -n "duckdb: " && duckdb --version | |
| echo -n "quarto: " && quarto --version | |
| echo -n "conda: " && conda --version | |
| echo -n "working directory: " && pwd | |
| conda info | |
| snakemake gh_release -n | |
| - name: Build database and upload | |
| env: | |
| AIRTABLE_API_KEY: ${{ secrets.AIRTABLE_API_KEY }} | |
| MOTHERDUCK_TOKEN: ${{ secrets.MOTHERDUCK_TOKEN }} | |
| GH_TOKEN: ${{ github.token }} | |
| run: | | |
| snakemake all_uploads -c all | |
| - name: Upload artifact | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: db-artifact | |
| path: gloss.duckdb | |
| overwrite: true | |
| # job 3 | |
| # release: | |
| # runs-on: ubuntu-latest | |
| # needs: build | |
| # steps: | |
| # - name: Download artifact | |
| # uses: actions/download-artifact@v4 | |
| # - name: Tag version | |
| # uses: codacy/git-version@2.8.0 | |
| # id: version | |
| # with: | |
| # prefix: 'v' | |
| # release-branch: 'main' | |
| # minor-identifier: 'minor-bump:' | |
| # major-identifier: 'major-bump:' |