Change WDL input variables to match better workspace naming conventions #42
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Code Analysis | |
| on: [push] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.12"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install ruff mypy pandas-stubs bio | |
| - name: Analyze code with ruff | |
| run: ruff check . | |
| - name: Check code format with ruff | |
| run: ruff format --check . | |
| - name: Analyze code with mypy | |
| run: mypy ./scripts/concat_seq_results.py |