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@CAST-genomics

Center for Admixture Science and Technology

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  1. haptools haptools Public

    Ancestry and haplotype aware simulation of genotypes and phenotypes for complex trait analysis

    Python 21 4

Repositories

Showing 10 of 14 repositories
  • cast-workflows Public

    Workflows used by the Center for Admixture Science and Technology

    CAST-genomics/cast-workflows’s past year of commit activity
    Python 1 1 1 4 Updated Feb 4, 2025
  • haptools Public

    Ancestry and haplotype aware simulation of genotypes and phenotypes for complex trait analysis

    CAST-genomics/haptools’s past year of commit activity
    Python 21 MIT 4 12 (1 issue needs help) 4 Updated Feb 3, 2025
  • pipsort Public
    CAST-genomics/pipsort’s past year of commit activity
    C++ 4 AGPL-3.0 0 0 0 Updated Feb 1, 2025
  • panCT Public

    Our pangenome analysis toolkit

    CAST-genomics/panCT’s past year of commit activity
    Python 1 0 1 2 Updated Jan 29, 2025
  • pangenome-api Public
    CAST-genomics/pangenome-api’s past year of commit activity
    Python 0 0 0 0 Updated Jan 5, 2025
  • hla_haplotypes Public
    CAST-genomics/hla_haplotypes’s past year of commit activity
    0 0 0 0 Updated Dec 10, 2024
  • personal-genomics-textbook Public

    Textbook for CSE284: Personal Genomics

    CAST-genomics/personal-genomics-textbook’s past year of commit activity
    Jupyter Notebook 2 MIT 0 1 1 Updated Oct 27, 2024
  • CAST-genomics.github.io Public

    CAST website

    CAST-genomics/CAST-genomics.github.io’s past year of commit activity
    HTML 0 2 0 0 Updated Oct 24, 2024
  • snakemake-gfa-complexity Public
    CAST-genomics/snakemake-gfa-complexity’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jul 2, 2024
  • phewas Public

    Perform phewas for STRs and other variants

    CAST-genomics/phewas’s past year of commit activity
    Python 1 GPL-3.0 1 0 1 Updated Dec 12, 2023
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