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SessionInfo.txt
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> sessionInfo()
R version 3.5.1 (2018-07-02)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 7 x64 (build 7601) Service Pack 1
Matrix products: default
locale:
[1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252 LC_MONETARY=English_United States.1252 LC_NUMERIC=C
[5] LC_TIME=English_United States.1252
attached base packages:
[1] stats4 parallel grid stats graphics grDevices utils datasets methods base
other attached packages:
[1] rmotifx_1.0 ggseqlogo_0.1 shinydashboard_0.7.1 cowplot_0.9.4 shiny_1.2.0 reshape2_1.4.3 heatmaply_0.15.2
[8] viridis_0.5.1 viridisLite_0.3.0 plotly_4.8.0 EGSEA_1.10.1 pathview_1.22.1 org.Hs.eg.db_3.7.0 topGO_2.34.0
[15] SparseM_1.77 GO.db_3.7.0 graph_1.60.0 AnnotationDbi_1.44.0 IRanges_2.16.0 S4Vectors_0.20.1 gage_2.32.1
[22] Biobase_2.42.0 BiocGenerics_0.28.0 magrittr_1.5 doParallel_1.0.14 iterators_1.0.10 foreach_1.4.4 verification_1.42
[29] dtw_1.20-1 proxy_0.4-23 CircStats_0.2-6 MASS_7.3-51.1 boot_1.3-20 fields_9.6 maps_3.3.0
[36] spam_2.2-2 dotCall64_1.0-0 gtools_3.8.1 cmapR_1.0.1 rhdf5_2.26.2 pacman_0.5.1 limma_3.38.3
[43] bindrcpp_0.2.2 forcats_0.3.0 stringr_1.4.0 dplyr_0.7.8 purrr_0.3.0 readr_1.3.1 tidyr_0.8.2
[50] tibble_2.0.1 ggplot2_3.1.0 tidyverse_1.2.1
loaded via a namespace (and not attached):
[1] tidyselect_0.2.5 RSQLite_2.1.1 htmlwidgets_1.3 TSP_1.1-6 trimcluster_0.1-2.1 KEGG.db_3.2.3
[7] R2HTML_2.3.2 munsell_0.5.0 codetools_0.2-16 DT_0.5 KEGGdzPathwaysGEO_1.20.0 withr_2.1.2
[13] colorspace_1.4-0 rstudioapi_0.9.0 robustbase_0.93-3 gbRd_0.4-11 labeling_0.3 Rdpack_0.10-1
[19] KEGGgraph_1.42.0 org.Rn.eg.db_3.7.0 hwriter_1.3.2 bit64_0.9-7 generics_0.0.2 gclus_1.3.2
[25] diptest_0.75-7 R6_2.3.0 Glimma_1.10.1 seriation_1.2-3 locfit_1.5-9.1 flexmix_2.3-14
[31] bitops_1.0-6 assertthat_0.2.0 promises_1.0.1 scales_1.0.0 nnet_7.3-12 gtable_0.2.0
[37] org.Mm.eg.db_3.7.0 rlang_0.3.1 splines_3.5.1 lazyeval_0.2.1 PADOG_1.24.0 broom_0.5.1
[43] yaml_2.2.0 modelr_0.1.3 crosstalk_1.0.0 backports_1.1.3 rsconnect_0.8.15 httpuv_1.4.5.1
[49] tools_3.5.1 gplots_3.0.1.1 RColorBrewer_1.1-2 HTMLUtils_0.1.7 Rcpp_1.0.0 plyr_1.8.4
[55] zlibbioc_1.28.0 RCurl_1.95-4.11 hgu133plus2.db_3.2.3 haven_2.0.0 cluster_2.0.7-1 data.table_1.12.2
[61] mvtnorm_1.0-8 whisker_0.3-2 matrixStats_0.54.0 hms_0.4.2 mime_0.6 GSVA_1.30.0
[67] xtable_1.8-3 globaltest_5.36.0 XML_3.98-1.17 mclust_5.4.2 hgu133a.db_3.2.3 readxl_1.2.0
[73] gridExtra_2.3 EGSEAdata_1.10.0 compiler_3.5.1 safe_3.22.0 KernSmooth_2.23-15 crayon_1.3.4
[79] htmltools_0.3.6 later_0.7.5 geneplotter_1.60.0 lubridate_1.7.4 DBI_1.0.0 fpc_2.1-11.1
[85] Matrix_1.2-17 cli_1.1.0 gdata_2.18.0 metap_1.1 bindr_0.1.1 pkgconfig_2.0.2
[91] registry_0.5 xml2_1.2.0 annotate_1.60.0 rngtools_1.3.1 webshot_0.5.1 pkgmaker_0.27
[97] XVector_0.22.0 bibtex_0.4.2 rvest_0.3.2 doRNG_1.7.1 digest_0.6.18 Biostrings_2.50.2
[103] cellranger_1.1.0 dendextend_1.9.0 edgeR_3.24.3 GSEABase_1.44.0 kernlab_0.9-27 modeltools_0.2-22
[109] GSA_1.03.1 nlme_3.1-137 jsonlite_1.6 Rhdf5lib_1.4.2 pillar_1.3.1 lattice_0.20-38
[115] KEGGREST_1.22.0 httr_1.4.0 DEoptimR_1.0-8 survival_2.43-3 glue_1.3.0 png_0.1-7
[121] shinythemes_1.1.2 prabclus_2.2-7 bit_1.1-14 Rgraphviz_2.26.0 class_7.3-15 stringi_1.2.4
[127] blob_1.1.1 caTools_1.17.1.1 memoise_1.1.0