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Something like a units.Model.to_molecules(vol=...) converter that can take a model in concentration units and quickly yield its molecular counts. This would be useful for stochastic simulations.
The text was updated successfully, but these errors were encountered:
This is partially addressed by PR #4, which adds the new SimulationUnits class and the set_molecule_volume function that can be used to enforce automatic conversion of parameters with molar concentrations to molecular counts as part of the model definition.
However, the functionality of something like a Model.to_molecules function has yet to be fully implemented. This is a bit more difficult since the units for expressions that include a concentration must be reconstructed after applying the appropriate conversion to parameters and observables.
Suggested by James Pino:
Something like a units.Model.to_molecules(vol=...) converter that can take a model in concentration units and quickly yield its molecular counts. This would be useful for stochastic simulations.
The text was updated successfully, but these errors were encountered: