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@BojarLab

BojarLab

Machine Learning in Glycobiology and Systems Biology

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  1. glycowork Public

    Package for processing and analyzing glycans and their role in biology.

    Jupyter Notebook 63 14

  2. CandyCrunch Public

    Predicting glycan structure from LC-MS/MS data

    Jupyter Notebook 25 6

Repositories

Showing 10 of 10 repositories
  • CandyCrunch Public

    Predicting glycan structure from LC-MS/MS data

    Jupyter Notebook 25 MIT 6 1 0 Updated Apr 17, 2025
  • glycowork Public

    Package for processing and analyzing glycans and their role in biology.

    Jupyter Notebook 63 MIT 14 0 0 Updated Apr 16, 2025
  • glycorender Public

    Bespoke renderer for GlycoDraw .svg into .pdf/.png

    Python 0 MIT 0 0 0 Updated Apr 16, 2025
  • G-look-like Public

    Analyzing structure-function relationships in glycans

    Jupyter Notebook 0 0 0 0 Updated Apr 10, 2025
  • GIFFLAR Public

    Glycan Informed Foundational Framework for Learning Abstract Representations, based on Combinatorial Complexes and Heterogeneous GNNs

    HTML 3 2 0 0 Updated Feb 28, 2025
  • FragmentFactory Public

    Devising human interpretable diagnostic glycan fragments

    Python 1 1 0 0 Updated Jan 21, 2025
  • MilkGlycans Public archive

    Code and data for constructing and analyzing biosynthetic networks from free milk oligosaccharides

    Jupyter Notebook 1 MIT 0 0 0 Updated Jun 8, 2023
  • scGlycomics_b16_branching Public

    Predicting single-cell glycosylation features from scRNA-seq

    Jupyter Notebook 0 MIT 2 0 0 Updated Jul 7, 2022
  • LectinOracle Public archive

    Deep learning model to predict interactions between proteins and glycans [LEGACY; use glycowork implementation]

    Jupyter Notebook 9 MIT 4 0 0 Updated Aug 16, 2021
  • SweetNet Public archive

    Graph convolutional neural networks for analyzing glycans [LEGACY; use glycowork implementation]

    Jupyter Notebook 17 MIT 6 1 0 Updated Mar 9, 2021