[FIX CONTINUOUS INTEGRATION]

BioSystemsUM · Nov 11, 2024 · 5b3582a · 5b3582a
1 parent 5b2806b
commit 5b3582a
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Showing 2 changed files with 5 additions and 6 deletions.
diff --git a/tests/integration_tests/test_dfa.py b/tests/integration_tests/test_dfa.py
@@ -11,7 +11,6 @@
 
 class TestDFA(TestCase):
 
-    @unittest.skip("Skipping this test in CI")
     def setUp(self) -> None:
         self.model_id = 'MODEL1507180028'
         self.dataset_id = 'DielModel'
@@ -26,7 +25,7 @@ def setUp(self) -> None:
                                                                      'results_troppo', self.dataset_id,
                                                                      'reconstructed_models', 'Diel_Model.xml'))
 
-    @unittest.skip("Skipping this test in CI")
+    @unittest.skipIf(os.getenv('CI') == 'true', "Skipping this test in CI environment")
     def test_sampling(self) -> None:
         day_sampling, night_sampling = self.dfa.sampling(thinning=100, n_samples=1000)
 
@@ -61,7 +60,7 @@ def test_sampling(self) -> None:
             expected_file = os.path.join(self.results_folder, '%s_sampling.csv' % modelname)
             self.assertTrue(os.path.exists(expected_file))
 
-    @unittest.skip("Skipping this test in CI")
+    @unittest.skipIf(os.getenv('CI') == 'true', "Skipping this test in CI environment")
     def test_ktest(self) -> None:
 
         self.dfa.sampling()
@@ -82,7 +81,7 @@ def test_ktest(self) -> None:
         expected_columns = ['Reaction', 'Pvalue', 'Padj', 'Reject', 'FC']
         self.assertListEqual(list(result_df.columns), expected_columns)
 
-    @unittest.skip
+    @unittest.skipIf(os.getenv('CI') == 'true', "Skipping this test in CI environment")
     def test_pathways(self) -> None:
 
         self.dfa.sampling()

diff --git a/tests/integration_tests/test_dfa_tomato.py b/tests/integration_tests/test_dfa_tomato.py
@@ -24,7 +24,7 @@ def setUp(self) -> None:
                                                                      self.dataset_id, 'reconstructed_models',
                                                                      'Tomato_Diel_Model.xml'))
 
-    @unittest.skip("Skipping this test in CI")
+    @unittest.skipIf(os.getenv('CI') == 'true', "Skipping this test in CI environment")
     def test_sampling(self) -> None:
         day_sampling, night_sampling = self.dfa.sampling(thinning=100, n_samples=1000)
 
@@ -59,7 +59,7 @@ def test_sampling(self) -> None:
             expected_file = os.path.join(self.results_folder, '%s_sampling.csv' % modelname)
             self.assertTrue(os.path.exists(expected_file))
 
-    @unittest.skip("Skipping this test in CI")
+    @unittest.skipIf(os.getenv('CI') == 'true', "Skipping this test in CI environment")
     def test_ktest(self) -> None:
 
         self.dfa.sampling()