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Windows build and NeuroML2 support#485

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subhacom wants to merge 60 commits intoBhallaLab:masterBhallaLab/moose-core:masterfrom subhacom:windows_buildsubhacom/moose-core:windows_buildCopy head branch name to clipboard

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Commits

Commits on May 20, 2024

• Fixed typo in macro check for BOOST

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Commits on Jun 12, 2024

• Updates for Windows MSVC build

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• Minor fixup for platform check with WIN32 macro

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• Fixup for getopt on Windows

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• Trying c++11 for mac build to fix syntax issue

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• Attempt to fix build

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• Fixes to build configs

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• Fixed lib name for moose used in linking moose.bin

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Commits on Jun 20, 2024

• Build updates for WIN32/MSVC

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• Trying to fix syntax error from newer C++ standard

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• Fixed cmake file to not include extern/getopt on non-win32

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• Try fixing apple build

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Commits on Jul 2, 2024

• Added a guide for setting up moose on WSL2

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• Correction in wsl guide

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• Added troubleshooting advice for WSL.

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Commits on Jul 3, 2024

• Added guide for mac build

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• Updated mac build/installation guide

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Commits on Jul 7, 2024

• Added meson build files

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Commits on Jul 9, 2024

• Finally, working windows build with meson

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Commits on Jul 10, 2024

• Windows MSVC build working with meson.

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Commits on Jul 15, 2024

• Minor fixes to meson build and pyproject

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• Fixed typo.

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• Some more cleanup in meson build

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Commits on Jul 16, 2024

• meson build updated for Ubuntu (tested on WSL)

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Commits on Jul 17, 2024

• Windows portability fix

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Commits on Jul 19, 2024

• Code cleanup of morphology reading

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Commits on Jul 30, 2024

• Fixes to NeuroML2 reader

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• Removed optimization in favor of simplicity

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Commits on Aug 23, 2024

• Support for voltage and Ca dependent channel in NeuroML2 reader

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• Merge branch 'windows_build'

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Commits on Aug 26, 2024

• Got 2D channel to work when reading in NeuroML2

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• Further cleanup of neuroml2 reader

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Commits on Aug 27, 2024

• Minor fix in neuroml2 reader

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Commits on Aug 28, 2024

• Fixed small bug in neuroml2 reader

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Commits on Aug 31, 2024

• Cleanup of build process.

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Commits on Sep 3, 2024

• Windows build working, HHChannel fixed, pymoose cleaned up

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• HHChannel2D cleanup

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Commits on Oct 3, 2024

• Minor fix for non-conda build

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Commits on Oct 18, 2024

• neuroml2 reader: Added option to use interpolation by default

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Commits on Oct 27, 2024

• Added instructions on build options

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• Minor update of build instructions.

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Commits on Nov 8, 2024

• Added moose class/object check in moose.isinstance_ function

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Commits on Nov 9, 2024

• Updated exprtk and fixed some deprecation warnings from meson

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• attempt to fix workflow

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• Fixed tab issues in workflow

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• Update pymoose.yml

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• Update pymoose.yml: tab and space mixup in github editor

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• Another attempt at fixing github workflow

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• Merge branch 'windows_build' of https://github.com/subhacom/moose-core into windows_build

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• Fixing github actions to build

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• github actions: fix for meson installation on ubuntu-lates

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• github actions: fix ninja installation on ubuntu latest

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• github actions: further fix for ubuntu

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Commits on Nov 10, 2024

• Fixing automatic build

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• Fix github action

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• Further fix to github action: activateing mamba env

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• github actions: Avoid pip upgared

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• github action fixes

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• github actions: try to fix gsl availability

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• Merge branch 'master' of https://github.com/BhallaLab/moose-core into windows_build

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