DESCRIPTION

Package: nucleoSim
Version: 1.23.1
Date: 2015-07-24
Title: Generate synthetic nucleosome maps
Description: This package can generate a synthetic map with reads covering
    the nucleosome regions as well as a synthetic map with
    forward and reverse reads emulating next-generation sequencing.
    The synthetic hybridization data of “Tiling Arrays” can also be generated.
    The user has choice between three different
    distributions for the read positioning: Normal, Student and Uniform.
    In addition, a visualization tool is provided to explore the synthetic 
    nucleosome maps.
Encoding: UTF-8
Authors@R: c(person("Rawane", "Samb",
    email="rawane.samb.1@ulaval.ca", role=c("aut")),
    person("Astrid", "Deschênes",
    email="adeschen@hotmail.com",
    role=c("cre","aut"), comment = c(ORCID = "0000-0001-7846-6749")),
    person("Pascal", "Belleau",
    email="pascal_belleau@hotmail.com", role=c("aut"), 
    comment = c(ORCID = "0000-0002-0802-1071")),
    person("Arnaud", "Droit",
    email="arnaud.droit@crchuq.ulaval.ca", role=c("aut")))
Imports:
    stats,
    IRanges,
    S4Vectors,
    graphics,
    methods
Suggests:
    BiocStyle,
    BiocGenerics,
    knitr,
    rmarkdown,
    testthat
License: Artistic-2.0
URL: https://github.com/arnauddroitlab/nucleoSim
BugReports: https://github.com/arnauddroitlab/nucleoSim/issues
VignetteBuilder: knitr
NeedsCompilation: no
biocViews: Genetics, Sequencing, Software, StatisticalMethod, Alignment
RoxygenNote: 7.1.2