_pkgdown.yml

#https://pkgdown.r-lib.org/articles/customise.html

name: My Website

output_dir: docs

template:
  bootstrap: 5
  bootswatch: minty #https://bootswatch.com/ has different themes you can use

navbar:
  bg: primary #If you want a different style you can check on bootstrap, e.g. for bootswatch: flatly = https://bootswatch.com/flatly/
  structure:
    left: [home, articles, reference, tutorials, news] #intro: “Get Started”, which links to a vignette with the same name as the package.#reference, if there are any .Rd files. #articles, if there are any vignettes or articles.#tutorials, if there any tutorials. #news, if NEWS.md exists.
    right: [github, python, manuscript]
  components:
    #Customize articles:
    articles:
      text: Tutorials
      icon: fa-book-open # icons can be found here: https://fontawesome.com/icons?d=gallery
      menu:
      - text: ChooseSettings
        href: articles/ChooseSettings.html
      - text: TutorialR
        href: articles/DataAnalysisExample.html
    #customize intro:
    reference:
      text: Reference
      icon: "fa-solid fa-rocket"
      href: reference/index.html
    #Customize github:
    github:
      icon: "fa-brands fa-github"
      href: https://github.com/ArianeMora/SiRCleR
    #Customize python:
    python:
      icon: "fa-brands fa-python"
      href: https://github.com/ArianeMora/scircm
    #Customize manuscript:
    manuscript:
      text: Manuscript
      icon: "fa-solid fa-dna"
      href: https://genomemedicine.biomedcentral.com/articles/10.1186/s13073-024-01415-3

home:
  sidebar:
    structure: [authors, toc, license] #other options: dev, links, community