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Improve Reconstructor & PtychoNN Training
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@stevehenke stevehenke released this 17 Aug 15:34
· 48 commits to master since this release
v0.6.0
d943a21
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Learn about vigilant mode.
  • Update dependency versions
  • Refactor to simplify plugins
  • Use floats for scan positions
  • Display message dialog when attempting to edit item without parameters
  • Include initializer name in probe/object table views
  • Handle exceptions when file saving fails
  • Support saving multi-mode probes to CSV
  • Transpose array dimensions when reading/writing MATLAB files
  • Add reader for Bionanoprobe MDA scan files
  • Support power decay and orthogonalization when initializing additional probe modes
  • Change scan/object mapping: midpoint of scan bounding box now anchored to center of object array
  • Object padding is customizable; object grows to maintain center point
  • Refactor state data input/output: output now includes object center
  • Refactor model to reduce code duplication between reconstructor library adapters
  • Reconstruction results are only added to the scan/probe/object repositories when changed
  • Add support for extracting object patches via interpolation
  • Add controls for changing tike log level
  • PtychoNN training and inference are now working
  • Implement circular buffers to support PtychoNN continual training workflows
  • Can save PtychoNN training data to NPZ file
  • Display loss plot in reconstructor view after training
  • Add batch mode training hook for workflows
  • Add reconstructor API for workflows
  • Click to display image view coordinates
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