Code

Paris formatting#161

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brendan-m-murphy merged 59 commits intodevelopACRG-Bristol/acrg:developfrom paris_formattingACRG-Bristol/acrg:paris_formattingCopy head branch name to clipboardApr 11, 2024

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Commits

Commits on Jan 9, 2024

• Initial commit

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Commits on Jan 10, 2024

• Added notebooks

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• Updated notebooks

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• added country_totals_alice_edits, bug fixes for variable names and changes for which ukmo mask countries are used

  

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Commits on Jan 12, 2024

• Added function to compute the mode

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Commits on Jan 19, 2024

• More updates, start of script

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Commits on Jan 23, 2024

• Added code for processing emissions

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• Splitting out sampling code

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Commits on Jan 24, 2024

• Updated sampling code

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Commits on Jan 26, 2024

• Added Stephan's files + work on script

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• use rename to rename dimension coordinates

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Commits on Feb 7, 2024

• Modified attributes parser to allow _ in names

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• Added alternate function to create RHIME model

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• Added dataclass for formatting inversion outputs

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• Added Countries class

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• New scipts to use InversionOutput and Countries

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Commits on Feb 13, 2024

• Added concentration processing code

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• Fixed code to get obs in (site, time) coords

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• changes to final1.py

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• Cleaning up old files

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• Formatting

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Commits on Feb 14, 2024

• Restored accidentally deleted file

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• Renaming emissions variables to latest template

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• Changed to alpha 3 country codes

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• Removed dead code

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• Formatting, renamed "final2.py"

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• Moved stats calculations to separate module

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• More reorganizing

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• More formatting, docstrings, etc

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• Added command line script

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• Removed unused code

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• time now in days since 1 jan 1970

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• Added code to select start of midpoint of period

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• Finished script

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Commits on Feb 19, 2024

• Fixed concentration units

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Commits on Feb 20, 2024

• Added command line option to process n_files

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Commits on Feb 22, 2024

• Improved code to find country codes

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• Fixed formatting of default file name

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• Fixed units bug, species bug

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Commits on Feb 23, 2024

• Fixed arg parser bug

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Commits on Mar 4, 2024

• Added option to pass country file path directly

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• Fixed order of dimensions

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Commits on Mar 5, 2024

• Mole fractions use mean by default

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• Fixup for previous commit

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• Updates to make InversionOutput without bc

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• Changed concentration calculations for no bc

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• Fix for getting prior args from rhime outs

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• Fixup: made mode default, mean option set by main

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• Fixup: changed which variables are kept

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• Fixup

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Commits on Mar 8, 2024

• New format for the concentration files of the paris outputs, matching the template: PARIS_Lagrangian_inversion_concentration_EUROPE.cdl

  

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Commits on Mar 11, 2024

• Fixing the concentration units problem using the template PARIS_Lagrangian_inversion_concentration_EUROPE.cdl

  

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• Add the template file.

  

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• Fixing problems occuring when the baseline is substracted.

  

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Commits on Mar 12, 2024

• Added optional flag to use means for emissions

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Commits on Mar 13, 2024

• x trace coords now made from basis regions

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• Explicitly set basis mat coords to match x coords

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Commits on Mar 19, 2024

• Fix datetime format issue. Add the averaging measurements period as an argument -p.

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• Merge remote-tracking branch 'origin/paris_formatting' into paris_formatting

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