Compare_SSH_model_obs.yml

name: Run Compare_SSH_model_obs 
 
on:
  workflow_run:
    workflows: [ "Run all recipes", "Run all failed" ]
    types:
      - completed
  workflow_dispatch:

jobs:
  run_recipe:
    runs-on: ubuntu-latest
    steps:
      - name: Get latest workflow run status
        uses: actions/github-script@v6
        id: latest-workflow-status
        with:
          script: |
            const runs = await github.rest.actions.listWorkflowRuns({
              owner: context.repo.owner,
              repo: context.repo.repo,
              workflow_id: 'Compare_SSH_model_obs.yml',
              per_page: 2
            })
            return runs.data.workflow_runs[1].conclusion
          result-encoding: string
      - name: Run Compare_SSH_model_obs
        if: ${{ github.event.workflow_run.name == 'Run all recipes' || ( github.event.workflow_run.name == 'Run all failed' && steps.latest-workflow-status.outputs.result != 'success' ) || github.event_name == 'workflow_dispatch' }}
        uses: appleboy/ssh-action@v0.1.7
        with:
          host: gadi.nci.org.au
          username: ${{secrets.GADI_USER}}
          key: ${{secrets.DEPLOY_KEY}}
          passphrase: ${{secrets.DEPLOY_KEY_PASSWORD}}
          command_timeout: 2400m
          script: |
            cd ${{secrets.GADI_SCRIPTS_DIR}}/../COSIMA-recipes/jobs
            qsub launch_Compare_SSH_model_obs.pbs
      - name: Get output log
        if: ${{ failure() || github.event.workflow_run.name == 'Run all recipes' || ( github.event.workflow_run.name == 'Run all failed' && steps.latest-workflow-status.outputs.result != 'success' ) || github.event_name == 'workflow_dispatch' }}
        uses: nicklasfrahm/scp-action@main
        with:
          direction: download
          host: gadi.nci.org.au
          username: ${{secrets.GADI_USER}}
          insecure_ignore_fingerprint: true
          key: ${{secrets.DEPLOY_KEY}}
          passphrase: ${{secrets.DEPLOY_KEY_PASSWORD}}
          source: ${{secrets.GADI_SCRIPTS_DIR}}/../COSIMA-recipes/logs/Compare_SSH_model_obs.out
          target: log.txt
      - name: Upload log as artifact
        if: ${{ failure() || github.event.workflow_run.name == 'Run all recipes' || ( github.event.workflow_run.name == 'Run all failed' && steps.latest-workflow-status.outputs.result != 'success' ) || github.event_name == 'workflow_dispatch' }}
        uses: actions/upload-artifact@v3
        with:
          name: output_log
          path: log.txt
      - name: Create Issue if fails
        if: ${{ failure() }}
        env:
          GH_TOKEN: ${{ secrets.GH_TOKEN }}
        run: |
          github_id=$(gh api --header "Accept: application/vnd.github+json" --header 'X-GitHub-Api-Version:2022-11-28' --method GET /repos/ACCESS-NRI/COSIMA-recipes-workflow/issues?state=open | jq '.[] | select(.title == "Recipe: Compare_SSH_model_obs failing") | .number')
          if [ -z "$github_id" ]
          then
            gh api --header "Accept: application/vnd.github+json" --header 'X-GitHub-Api-Version:2022-11-28' --method POST /repos/ACCESS-NRI/COSIMA-recipes-workflow/issues -f title="Recipe: Compare_SSH_model_obs failing" -f body="Please check log in action workflow"
          #else
          #  gh api --method POST -H "Accept: application/vnd.github+json" -H "X-GitHub-Api-Version: 2022-11-28" /repos/ACCESS-NRI/COSIMA-recipes-workflow/issues/$github_id/comments -f body="Still failing"
          fi
      - name: Close Issue if success
        env:
          GH_TOKEN: ${{ secrets.GH_TOKEN }}
        run: |
          github_id=$(gh api --header "Accept: application/vnd.github+json" --header 'X-GitHub-Api-Version:2022-11-28' --method GET /repos/ACCESS-NRI/COSIMA-recipes-workflow/issues?state=open | jq '.[] | select(.title == "Recipe: Compare_SSH_model_obs failing") | .number')
          if [ ! -z "$github_id" ]
          then
            gh issue close --repo ACCESS-NRI/COSIMA-recipes-workflow $github_id
          fi